Identifying Interaction Sites in "Recalcitrant" Proteins: Predicted Protein and RNA Binding Sites in Rev Proteins of HIV-1 and EIAV Agree with Experimental Data.
Michael TerribiliniJae-Hyung LeeChanghui YanRobert L. JerniganSusan CarpenterPublished in: Pacific Symposium on Biocomputing (2006)
Keyphrases
- experimental data
- dna binding
- protein interaction
- binding sites
- protein protein
- genome wide
- protein families
- cis regulatory
- protein protein interactions
- protein function
- structural motifs
- protein sequences
- transcription factors
- gene expression
- high throughput
- predicting protein
- protein structure
- computational methods
- experimentally determined
- amino acids
- protein complexes
- biological sequences
- motif discovery
- secondary structure
- dna sequences
- biological processes
- protein interaction networks
- biological data
- sequence data
- amino acid sequences
- biological systems
- genome sequences
- subcellular localization
- protein folding
- functional modules
- microarray
- computational biology
- statistical significance
- drug discovery
- sequence analysis
- human genome
- interaction networks
- systems biology
- transcription factor binding sites
- genomic data
- influenza virus
- coding regions
- biological networks
- alternative splicing
- cell cycle
- protein protein interaction networks
- component analysis
- protein structure prediction