Bruno W. S. Sobral

Publication Activity (10 Years)

Years Active: 2000-2015
Publications (10 Years): 2

Top Topics

Infectious Disease

Scientific Data Analysis

Semantic Role Labeling

Computational Biology

Top Venues

Nucleic Acids Res.

Publications

Andrew S. Warren, Cristina Aurrecoechea, Brian P. Brunk, Prerak Desai, Scott J. Emrich, Gloria I. Giraldo-Calderón, Omar S. Harb, Deborah Hix, Daniel Lawson, Dustin Machi, Chunhong Mao, Michael McClelland, Eric K. Nordberg, Maulik Shukla, Leslie B. Vosshall, Alice R. Wattam, Rebecca Will, Hyun Seung Yoo, Bruno W. S. Sobral
RNA-Rocket: an RNA-Seq analysis resource for infectious disease research. Bioinform. 31 (9) (2015)
Chunhong Mao, David Abraham, Alice R. Wattam, Meredith J. C. Wilson, Maulik Shukla, Hyun Seung Yoo, Bruno W. S. Sobral
Curation, integration and visualization of bacterial virulence factors in PATRIC. Bioinform. 31 (2) (2015)
Alice R. Wattam, David Abraham, Oral Dalay, Terry Disz, Timothy Driscoll, Joseph L. Gabbard, Joseph J. Gillespie, Roger Gough, Deborah Hix, Ronald W. Kenyon, Dustin Machi, Chunhong Mao, Eric K. Nordberg, Robert Olson, Ross A. Overbeek, Gordon D. Pusch, Maulik Shukla, Julie Schulman, Rick L. Stevens, Daniel E. Sullivan, Veronika Vonstein, Andrew S. Warren, Rebecca Will, Meredith J. C. Wilson, Hyun Seung Yoo, Chengdong Zhang, Yan Zhang, Bruno W. S. Sobral
PATRIC, the bacterial bioinformatics database and analysis resource. Nucleic Acids Res. 42 (Database-Issue) (2014)
Sampo Pyysalo, Tomoko Ohta, Rafal Rak, Daniel E. Sullivan, Chunhong Mao, Chunxia Wang, Bruno W. S. Sobral, Jun'ichi Tsujii, Sophia Ananiadou
Overview of the ID, EPI and REL tasks of BioNLP Shared Task 2011. BMC Bioinform. 13 (S-11) (2012)
Timothy Driscoll, Joseph L. Gabbard, Chunhong Mao, Oral Dalay, Maulik Shukla, Clark C. Freifeld, Anne Gatewood Hoen, John S. Brownstein, Bruno W. S. Sobral
Integration and visualization of host-pathogen data related to infectious diseases. Bioinform. 27 (16) (2011)
Bruno W. S. Sobral
Informatics-driven Infectious Disease Research. BIODEVICES (2011)
Bruno W. S. Sobral, Chunhong Mao, Maulik Shukla, Daniel E. Sullivan, Chengdong Zhang
Informatics-Driven Infectious Disease Research. BIOSTEC (Selected Papers) (2011)
Sampo Pyysalo, Tomoko Ohta, Rafal Rak, Daniel E. Sullivan, Chunhong Mao, Chunxia Wang, Bruno W. S. Sobral, Jun'ichi Tsujii, Sophia Ananiadou
Overview of the Infectious Diseases (ID) task of BioNLP Shared Task 2011. BioNLP@ACL (Shared Task) (2011)
Sampo Pyysalo, Tomoko Ohta, Han-Cheol Cho, Daniel E. Sullivan, Chunhong Mao, Bruno W. S. Sobral, Jun'ichi Tsujii, Sophia Ananiadou
Towards Event Extraction from Full Texts on Infectious Diseases. BioNLP@ACL (2010)
Tim Driscoll, Matthew D. Dyer, T. M. Murali, Bruno W. S. Sobral
PIG - the pathogen interaction gateway. Nucleic Acids Res. 37 (Database-Issue) (2009)
Shenghua Li, Paul Brazhnik, Bruno W. S. Sobral, John J. Tyson
. PLoS Comput. Biol. 5 (8) (2009)
C. Zhang, Oswald Crasta, S. Cammer, Rebecca Will, Ron Kenyon, Daniel E. Sullivan, Q. Yu, W. Sun, R. Jha, D. Liu, Tian Xue, Y. Zhang, M. Moore, Peter B. McGarvey, Hongzhan Huang, Yongxing Chen, J. Zhang, Raja Mazumder, Cathy H. Wu, Bruno W. S. Sobral
An emerging cyberinfrastructure for biodefense pathogen and pathogen-host data. Nucleic Acids Res. 36 (Database-Issue) (2008)
Shenghua Li, Paul Brazhnik, Bruno W. S. Sobral, John J. Tyson
Stalked Cells. PLoS Comput. Biol. 4 (1) (2008)
Matthew D. Dyer, T. M. Murali, Bruno W. S. Sobral
Computational prediction of host-pathogen protein-protein interactions. ISMB/ECCB (Supplement of Bioinformatics) (2007)
E. E. Snyder, N. Kampanya, J. Lu, Eric K. Nordberg, H. R. Karur, Maulik Shukla, Jeetendra Soneja, Y. Tian, Tian Xue, Hyun Seung Yoo, Fengkai Zhang, C. Dharmanolla, N. V. Dongre, Joseph J. Gillespie, J. Hamelius, M. Hance, K. I. Huntington, D. Jukneliene, J. Koziski, L. Mackasmiel, S. P. Mane, V. Nguyen, A. Purkayastha, J. Shallom, G. Yu, Y. Guo, Joseph L. Gabbard, Deborah Hix, A. F. Azad, S. C. Baker, S. M. Boyle, Y. Khudyakov, X. J. Meng, C. Rupprecht, J. Vinje, Oswald Crasta, M. J. Czar, Allan Dickerman, J. Dana Eckart, Ron Kenyon, Rebecca Will, João C. Setubal, Bruno W. S. Sobral
PATRIC: The VBI PathoSystems Resource Integration Center. Nucleic Acids Res. 35 (Database-Issue) (2007)
Tian Xue, Boyu Yang, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral
A Generalized Framework for Pathosystems Informatics & Bioinformatics Web Services. BIOCOMP (2007)
Jing Zhao, Tian Xue, Boyu Yang, Kelly Williams, Alice R. Wattam, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral
Genome Annotation and Comparison System. BIOCOMP (2006)
Boyu Yang, Tian Xue, Jing Zhao, Chaitanya Kommidi, Jeetendra Soneja, Jian Li, Rebecca Will, Bruce Sharp, Ron Kenyon, Oswald Crasta, Bruno W. S. Sobral
Bioinformatics Web Services. BIOCOMP (2006)
Chunhong Mao, Jing Qiu, Chunxia Wang, Trevor C. Charles, Bruno W. S. Sobral
NodMutDB: a database for genes and mutants involved in symbiosis. Bioinform. 21 (12) (2005)
Boyu Yang, J. Dana Eckart, Eric K. Nordberg, Bruno W. S. Sobral
ToolBus - An Interoperable Environment for Biological Researchers. METMBS (2005)
Bruno W. S. Sobral
Cyberinfrastructure for PathoSystems Biology. BSB (2005)
Yongqun He, Richard R. Vines, Alice R. Wattam, Georgiy V. Abramochkin, Allan Dickerman, J. Dana Eckart, Bruno W. S. Sobral
PIML: the Pathogen Information Markup Language. Bioinform. 21 (1) (2005)
J. Dana Eckart, Bruno W. S. Sobral
A Life Scientist's Gateway to Distributed Data Management and Computing: The PathPort/ToolBus Framework. OMICS 7 (1) (2003)
Eva Huala, Allan Dickerman, Margarita Garcia-Hernandez, Danforth Weems, Leonore Reiser, Frank LaFond, David Hanley, Donald Kiphart, Mingzhe Zhuang, Wen Huang, Lukas A. Mueller, Debika Bhattacharyya, Devaki Bhaya, Bruno W. S. Sobral, William D. Beavis, David Meinke, Christopher D. Town, Chris Somerville, Seung Yon Rhee
The Arabidopsis Information Resource (TAIR): a comprehensive database and web-based information retrieval, analysis, and visualization system for a model plant. Nucleic Acids Res. 29 (1) (2001)
Adam C. Siepel, Andrew D. Farmer, Andrew N. Tolopko, Mingzhe Zhuang, Pedro Mendes, William D. Beavis, Bruno W. S. Sobral
ISYS: a decentralized, component-based approach to the integration of heterogeneous bioinformatics resources. Bioinform. 17 (1) (2001)
Mark E. Waugh, Peter T. Hraber, Jennifer W. Weller, Yihe Wu, Guanghong Chen, Jeff T. Inman, Donald Kiphart, Bruno W. S. Sobral
The Phytophthora Genome Initiative Database: informatics and analysis for distributed pathogenomic research. Nucleic Acids Res. 28 (1) (2000)