Ana Tereza Ribeiro de Vasconcelos

Publication Activity (10 Years)

Years Active: 2000-2023
Publications (10 Years): 12

Top Topics

Protein Interaction

Sufficiently Small

Machine Learning

Top Venues

Database J. Biol. Databases Curation

Publications

Rafael Mina Piergiorge, Ronaldo da Silva Francisco Junior, Ana Tereza Ribeiro de Vasconcelos, Cíntia Barros Santos-Rebouças
and other developmental genes in Alzheimer's disease-associated brain ceRNA network. Comput. Biol. Medicine 166 (2023)
Wentai Ma, Jing Yang, Haoyi Fu, Chao Su, Caixia Yu, Qihui Wang, Ana Tereza Ribeiro de Vasconcelos, Georgii A. Bazykin, Yiming Bao, Mingkun Li
Genomic Perspectives on the Emerging SARS-CoV-2 Omicron Variant. Genom. Proteom. Bioinform. 20 (1) (2022)
Yasmmin Cortes Martins, Artur Ziviani, Marisa Fabiana Nicolás, Ana Tereza Ribeiro de Vasconcelos
Large-Scale Protein Interactions Prediction by Multiple Evidence Analysis Associated With an In-Silico Curation Strategy. Frontiers Bioinform. 1 (2021)
Felipe Dalvi-Garcia, Luís L. Fonseca, Ana Tereza Ribeiro de Vasconcelos, Cecilia Hedin-Pereira, Eberhard O. Voit
A model of dopamine and serotonin-kynurenine metabolism in cortisolemia: Implications for depression. PLoS Comput. Biol. 17 (5) (2021)
Kary A. C. S. Ocaña, Marcelo Galheigo, Carla Osthoff, Luiz M. R. Gadelha Jr., Fábio Porto, Antônio Tadeu A. Gomes, Daniel de Oliveira, Ana Tereza Ribeiro de Vasconcelos
BioinfoPortal: A scientific gateway for integrating bioinformatics applications on the Brazilian national high-performance computing network. Future Gener. Comput. Syst. 107 (2020)
Fabio Ribeiro Cerqueira, Ana Tereza Ribeiro de Vasconcelos
OCCAM: prediction of small ORFs in bacterial genomes by means of a target-decoy database approach and machine learning techniques. Database J. Biol. Databases Curation 2020 (2020)
Yasmmin Cortes Martins, Maria Cláudia Cavalcanti, Luis Willian Pacheco Arge, Artur Ziviani, Ana Tereza Ribeiro de Vasconcelos
OntoPPI: Towards Data Formalization on the Prediction of Protein Interactions. MTSR (2019)
Kary Ann del Carmen Ocaña Gautherot, Marcelo Galheigo, Carla Osthoff, Luiz M. R. Gadelha Jr., Antônio Tadeu A. Gomes, Daniel de Oliveira, Fábio Porto, Ana Tereza Ribeiro de Vasconcelos
Towards a Science Gateway for Bioinformatics: Experiences in the Brazilian System of High Performance Computing. CCGRID (2019)
Maria Luiza Mondelli, Thiago Magalhães, Guilherme Loss, Michael Wilde, Ian T. Foster, Marta Mattoso, Daniel S. Katz, Helio J. C. Barbosa, Ana Tereza Ribeiro de Vasconcelos, Kary A. C. S. Ocaña, Luiz M. R. Gadelha Jr.
BioWorkbench: A High-Performance Framework for Managing and Analyzing Bioinformatics Experiments. CoRR (2018)
Yuri Bento Marques, Alcione de Paiva Oliveira, Ana Tereza Ribeiro de Vasconcelos, Fabio Ribeiro Cerqueira
Erratum to: Mirnacle: machine learning with SMOTE and random forest for improving selectivity in pre-miRNA ab initio prediction. BMC Bioinform. 18 (1) (2017)
Yuri Bento Marques, Alcione de Paiva Oliveira, Ana Tereza Ribeiro de Vasconcelos, Fabio Ribeiro Cerqueira
Mirnacle: machine learning with SMOTE and random forest for improving selectivity in pre-miRNA ab initio prediction. BMC Bioinform. 17 (S-18) (2016)
Jorge S. Oliveira, Wydemberg Araújo, Ana Isabela Lopes Sales, Alaine de Brito Guerra, Sinara Carla da Silva Araújo, Ana Tereza Ribeiro de Vasconcelos, Lucymara F. Agnez-Lima, Ana Teresa Freitas
BioSurfDB: knowledge and algorithms to support biosurfactants and biodegradation studies. Database J. Biol. Databases Curation 2015 (2015)
Miria C. Correa, Helena F. Deus, Ana Tereza Ribeiro de Vasconcelos, Yuki Hayashi, Jaffer A. Ajani, Srikrishna V. Patnana, Jonas S. Almeida
AGUIA: autonomous graphical user interface assembly for clinical trials semantic data services. BMC Medical Informatics Decis. Mak. 10 (2010)
Diogo F. Veiga, Helena F. Deus, Caner Akdemir, Ana Tereza Ribeiro de Vasconcelos, Jonas S. Almeida
DASMiner: discovering and integrating data from DAS sources. BMC Syst. Biol. 3 (2009)
Luiz Gonzaga Almeida, Noboru J. Sakabe, Alice R. de Oliveira, Maria Cristina C. Silva, Alex S. Mundstein, Tzeela Cohen, Yao-Tseng Chen, Ramon Chua, Sita Gurung, Sacha Gnjatic, Achim A. Jungbluth, Otavia L. Caballero, Amos Bairoch, Eva Kiesler, Sarah L. White, Andrew J. G. Simpson, Lloyd J. Old, Anamaria A. Camargo, Ana Tereza Ribeiro de Vasconcelos
CTdatabase: a knowledge-base of high-throughput and curated data on cancer-testis antigens. Nucleic Acids Res. 37 (Database-Issue) (2009)
Janet Piñero González, Olimpia Carrillo Farnés, Ana Tereza Ribeiro de Vasconcelos, Abel González Pérez
Conservation of key members in the course of the evolution of the insulin signaling pathway. Biosyst. 95 (1) (2009)
Vladimir Espinosa Angarica, Abel González Pérez, Ana Tereza Ribeiro de Vasconcelos, Julio Collado-Vides, Bruno Contreras-Moreira
Prediction of TF target sites based on atomistic models of protein-DNA complexes. BMC Bioinform. 9 (2008)
Maria Fernanda B. Wanderley, João C. P. da Silva, Carlos Cristiano H. Borges, Ana Tereza Ribeiro de Vasconcelos
Application of Genetic Algorithms to the Genetic Regulation Problem. BSB (2008)
Marco Vilela, I-Chun Chou, Susana Vinga, Ana Tereza Ribeiro de Vasconcelos, Eberhard O. Voit, Jonas S. Almeida
Parameter optimization in S-system models. BMC Syst. Biol. 2 (2008)
Juliana S. Bernardes, Jorge H. Fernandez, Ana Tereza Ribeiro de Vasconcelos
Structural descriptor database: a new tool for sequence-based functional site prediction. BMC Bioinform. 9 (2008)
Abel González Pérez, Vladimir Espinosa Angarica, Ana Tereza Ribeiro de Vasconcelos, Julio Collado-Vides
Tractor_DB (version 2.0): a database of regulatory interactions in gamma-proteobacterial genomes. Nucleic Acids Res. 35 (Database-Issue) (2007)
Marco Vilela, Carlos Cristiano H. Borges, Susana Vinga, Ana Tereza Ribeiro de Vasconcelos, Helena Santos, Eberhard O. Voit, Jonas S. Almeida
Automated smoother for the numerical decoupling of dynamics models. BMC Bioinform. 8 (2007)
Abel D. González, Vladimir Espinosa Angarica, Ana Tereza Ribeiro de Vasconcelos, Ernesto Pérez-Rueda, Julio Collado-Vides
TRACTOR_DB: a database of regulatory networks in gamma-proteobacterial genomes. Nucleic Acids Res. 33 (Database-Issue) (2005)
Ana Tereza Ribeiro de Vasconcelos, Ana Carolina R. Guimarães, Carlos Henrique M. Castelletti, Célia S. Caruso, Cristina Ribeiro, Fabiano Yokaichiya, Geraldo R. G. Armôa, Gislaine da Silva P. Pereira, Israel T. da Silva, Carlos G. Schrago, Adélia L. V. Fernandes, Aline R. da Silveira, André G. Carneiro, Bruno M. Carvalho, Carlos Juliano M. Viana, Daniel Gramkow, Franklin J. Lima, Luiz G. G. Corrêa, Maurício de Alvarenga Mudado, Pablo Nehab-Hess, Rangel de Souza, Régis L. Corrêa, Claudia A. M. Russo
MamMiBase: a mitochondrial genome database for mammalian phylogenetic studies. Bioinform. 21 (10) (2005)
Marylens Hernández Guía, Abel González Pérez, Vladimir Espinosa Angarica, Ana Tereza Ribeiro de Vasconcelos, Julio Collado-Vides
Complementing computationally predicted regulatory sites in Tractor_DB using a pattern matching approach. Silico Biol. 5 (2) (2004)
Luiz G. P. Almeida, Roger F. C. Paixão, Rangel C. Souza, Gisele C. da Costa, Frank J. A. Barrientos, M. Trindade dos Santos, Darcy F. de Almeida, Ana Tereza Ribeiro de Vasconcelos
A System for Automated Bacterial (genome) Integrated Annotation - SABIA. Bioinform. 20 (16) (2004)
Carlos Azevedo, Alexandre Plastino, Ana Tereza Ribeiro de Vasconcelos
Procsimo: uma Ferramenta de Procura de Similaridade entre Operons. WOB (2003)
Ana Tereza Ribeiro de Vasconcelos, L. Gonzaga, Rangel C. Souza, D. Q. Mendes, Roger F. C. Paixão, R. Kersanach, M. Oliveira, S. M. Martins, Andrew J. G. Simpson
A Tool for Automatic Genome Annotation. German Conference on Bioinformatics (2001)
Ana Tereza Ribeiro de Vasconcelos, Marco A. Grivet Mattoso Maia, Darcy F. de Almeida
Short interrupted palindromes on the extragenic DNA of Escherichia coli K-12, Haemophilus influenzae and Neisseria meningitidis. Bioinform. 16 (11) (2000)