Alexey A. Gurevich

Publication Activity (10 Years)

Years Active: 2012-2023
Publications (10 Years): 7

Top Topics

Genomic Sequences

Evaluation Model

Gel Electrophoresis

Statistical Significance

Top Venues

J. Comput. Biol.

Nucleic Acids Res.

Publications

Alla Mikheenko, Vladislav Saveliev, Pascal Hirsch, Alexey A. Gurevich
WebQUAST: online evaluation of genome assemblies. Nucleic Acids Res. 51 (W1) (2023)
Alla Mikheenko, Andrey V. Bzikadze, Alexey A. Gurevich, Karen H. Miga, Pavel A. Pevzner
TandemTools: mapping long reads and assessing/improving assembly quality in extra-long tandem repeats. Bioinform. 36 (Supplement-1) (2020)
Azat M. Tagirdzhanov, Alexander Shlemov, Alexey A. Gurevich
NPS: scoring and evaluating the statistical significance of peptidic natural product-spectrum matches. Bioinform. 35 (14) (2019)
Bahar Behsaz, Hosein Mohimani, Alexey A. Gurevich, Andrey D. Prjibelski, Mark F. Fisher, Larry Smarr, Pieter C. Dorrestein, Joshua S. Mylne, Pavel A. Pevzner
De Novo Peptide Sequencing Reveals a Vast Cyclopeptidome in Human Gut and Other Environments. RECOMB (2019)
Alla Mikheenko, Andrey D. Prjibelski, Vladislav Saveliev, Dmitry Antipov, Alexey A. Gurevich
Versatile genome assembly evaluation with QUAST-LG. Bioinform. 34 (13) (2018)
Alla Mikheenko, Vladislav Saveliev, Alexey A. Gurevich
MetaQUAST: evaluation of metagenome assemblies. Bioinform. 32 (7) (2016)
Alla Mikheenko, Gleb Valin, Andrey D. Prjibelski, Vladislav Saveliev, Alexey A. Gurevich
assembly evaluation. Bioinform. 32 (21) (2016)
Irina Vasilinetc, Andrey D. Prjibelski, Alexey A. Gurevich, Anton I. Korobeynikov, Pavel A. Pevzner
Assembling short reads from jumping libraries with large insert sizes. Bioinform. 31 (20) (2015)
Andrey D. Prjibelski, Irina Vasilinetc, Anton Bankevich, Alexey A. Gurevich, Tatiana Krivosheeva, Sergey Nurk, Son K. Pham, Anton I. Korobeynikov, Alla L. Lapidus, Pavel A. Pevzner
ExSPAnder: a universal repeat resolver for DNA fragment assembly. Bioinform. 30 (12) (2014)
Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelski, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Scott R. Clingenpeel, Tanja Woyke, Jeffrey S. McLean, Roger Lasken, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner
Assembling Single-Cell Genomes and Mini-Metagenomes From Chimeric MDA Products. J. Comput. Biol. 20 (10) (2013)
Alexey A. Gurevich, Vladislav Saveliev, Nikolay Vyahhi, Glenn Tesler
QUAST: quality assessment tool for genome assemblies. Bioinform. 29 (8) (2013)
Sergey Nurk, Anton Bankevich, Dmitry Antipov, Alexey A. Gurevich, Anton I. Korobeynikov, Alla L. Lapidus, Andrey D. Prjibelsky, Alex Pyshkin, Alexander Sirotkin, Yakov Sirotkin, Ramunas Stepanauskas, Jeffrey S. McLean, Roger Lasken, Scott R. Clingenpeel, Tanja Woyke, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner
Assembling Genomes and Mini-metagenomes from Highly Chimeric Reads. RECOMB (2013)
Anton Bankevich, Sergey Nurk, Dmitry Antipov, Alexey A. Gurevich, Mikhail Dvorkin, Alexander S. Kulikov, Valery M. Lesin, Sergey I. Nikolenko, Son K. Pham, Andrey D. Prjibelski, Alex Pyshkin, Alexander Sirotkin, Nikolay Vyahhi, Glenn Tesler, Max A. Alekseyev, Pavel A. Pevzner
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing. J. Comput. Biol. 19 (5) (2012)