Ultra-fast sequence clustering from similarity networks with SiLiX.
Vincent MieleSimon PenelLaurent DuretPublished in: BMC Bioinform. (2011)
Keyphrases
- similarity function
- clustering algorithm
- similarity calculation
- similarity measure
- clustering method
- k means
- similar objects
- dissimilarity measure
- high similarity
- similarity assessment
- distance metric
- proximity measures
- longest common subsequence
- sequence similarity
- similarity computation
- cluster analysis
- data clustering
- measuring similarity
- network structure
- distance function
- unsupervised learning
- information theoretic
- cosine similarity
- similarity matrix
- multidimensional scaling
- heterogeneous information networks
- data points
- categorical data
- document clustering
- euclidean distance
- distance measure
- criterion function
- social networks
- determined automatically
- community discovery
- heterogeneous networks
- semantic similarity
- spectral clustering
- computer networks
- outlier detection