Tiejun Cheng

Publication Activity (10 Years)

Years Active: 2007-2023
Publications (10 Years): 14

Top Topics

Arabidopsis Thaliana

Scientific Articles

Top Venues

Nucleic Acids Res.

J. Cheminformatics

Int. J. Syst. Assur. Eng. Manag.

Publications

Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan E. Bolton
PubChem 2023 update. Nucleic Acids Res. 51 (D1) (2023)
Qingliang Li, Sunghwan Kim, Leonid Zaslavsky, Tiejun Cheng, Bo Yu, Evan E. Bolton
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF. SWAT4HCLS (2023)
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan Bolton
PubChem in 2021: new data content and improved web interfaces. Nucleic Acids Res. 49 (Database-Issue) (2021)
Leonid Zaslavsky, Tiejun Cheng, Asta Gindulyte, Siqian He, Sunghwan Kim, Qingliang Li, Paul A. Thiessen, Bo Yu, Evan Bolton
Discovering and Summarizing Relationships Between Chemicals, Genes, Proteins, and Diseases in PubChem. Frontiers Res. Metrics Anal. 6 (2021)
Sushma Naithani, Parul Gupta, Justin Preece, Peter D'Eustachio, Justin Elser, Priyanka Garg, Daemon A. Dikeman, Jason Kiff, Justin Cook, Andrew Olson, Sharon Wei, Marcela K. Tello-Ruiz, Antonio Fabregat Mundo, Alfonso Muñoz-Pomer Fuentes, Suhaib Mohammed, Tiejun Cheng, Evan Bolton, Irene Papatheodorou, Lincoln Stein, Doreen Ware, Pankaj Jaiswal
Plant Reactome: a knowledgebase and resource for comparative pathway analysis. Nucleic Acids Res. 48 (Database-Issue) (2020)
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Jian Zhang, Asta Gindulyte, Evan Bolton
PUG-View: programmatic access to chemical annotations integrated in PubChem. J. Cheminformatics 11 (1) (2019)
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan Bolton
PubChem 2019 update: improved access to chemical data. Nucleic Acids Res. 47 (Database-Issue) (2019)
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Bo Yu, Evan Bolton
An update on PUG-REST: RESTful interface for programmatic access to PubChem. Nucleic Acids Res. 46 (Webserver-Issue) (2018)
Tiejun Cheng, Panpan Wang, Qianyi Lu
Risk scenario prediction for sudden water pollution accidents based on Bayesian networks. Int. J. Syst. Assur. Eng. Manag. 9 (5) (2018)
Tiejun Cheng, Qianli Xu, Fengping Wu
Research on the adaptability evaluation model for emergency response plan based on 2-tuple linguistic. Int. J. Syst. Assur. Eng. Manag. 8 (2s) (2017)
Takako Takeda, Ming Hao, Tiejun Cheng, Stephen H. Bryant, Yanli Wang
Predicting drug-drug interactions through drug structural similarities and interaction networks incorporating pharmacokinetics and pharmacodynamics knowledge. J. Cheminformatics 9 (1) (2017)
Amrita Roy Choudhury, Tiejun Cheng, Lon Phan, Stephen H. Bryant, Yanli Wang
Supporting precision medicine by data mining across multi-disciplines: an integrative approach for generating comprehensive linkages between single nucleotide variants (SNVs) and drug-binding sites. Bioinform. 33 (11) (2017)
Yanli Wang, Stephen H. Bryant, Tiejun Cheng, Jiyao Wang, Asta Gindulyte, Benjamin A. Shoemaker, Paul A. Thiessen, Siqian He, Jian Zhang
PubChem BioAssay: 2017 update. Nucleic Acids Res. 45 (Database-Issue) (2017)
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Bo Yu, Benjamin A. Shoemaker, Jiyao Wang, Evan Bolton, Yanli Wang, Stephen H. Bryant
Literature information in PubChem: associations between PubChem records and scientific articles. J. Cheminformatics 8 (1) (2016)
Yongmei Pan, Tiejun Cheng, Yanli Wang, Stephen H. Bryant
Pathway Analysis for Drug Repositioning Based on Public Database Mining. J. Chem. Inf. Model. 54 (2) (2014)
Yanli Wang, Tugba O. Suzek, Jian Zhang, Jiyao Wang, Siqian He, Tiejun Cheng, Benjamin A. Shoemaker, Asta Gindulyte, Stephen H. Bryant
PubChem BioAssay: 2014 update. Nucleic Acids Res. 42 (Database-Issue) (2014)
Tiejun Cheng, Yanli Wang, Stephen H. Bryant
FSelector: a Ruby gem for feature selection. Bioinform. 28 (21) (2012)
Tiejun Cheng, Qingliang Li, Yanli Wang, Stephen H. Bryant
Identifying Compound-Target Associations by Combining Bioactivity Profile Similarity Search and Public Databases Mining. J. Chem. Inf. Model. 51 (9) (2011)
Tiejun Cheng, Qingliang Li, Yanli Wang, Stephen H. Bryant
Binary Classification of Aqueous Solubility Using Support Vector Machines with Reduction and Recombination Feature Selection. J. Chem. Inf. Model. 51 (2) (2011)
Tiejun Cheng, Zhihai Liu, Renxiao Wang
A knowledge-guided strategy for improving the accuracy of scoring functions in binding affinity prediction. BMC Bioinform. 11 (2010)
Tiejun Cheng, Yanli Wang, Stephen H. Bryant
Investigating the correlations among the chemical structures, bioactivity profiles and molecular targets of small molecules. Bioinform. 26 (22) (2010)
Xun Li, Yan Li, Tiejun Cheng, Zhihai Liu, Renxiao Wang
Evaluation of the performance of four molecular docking programs on a diverse set of protein-ligand complexes. J. Comput. Chem. 31 (11) (2010)
Tiejun Cheng, Xun Li, Yan Li, Zhihai Liu, Renxiao Wang
Comparative Assessment of Scoring Functions on a Diverse Test Set. J. Chem. Inf. Model. 49 (4) (2009)
Yuan Zhao, Tiejun Cheng, Renxiao Wang
Automatic Perception of Organic Molecules Based on Essential Structural Information. J. Chem. Inf. Model. 47 (4) (2007)
Tiejun Cheng, Yuan Zhao, Xun Li, Fu Lin, Yong Xu, Xing-long Zhang, Yan Li, Renxiao Wang, Luhua Lai
Computation of Octanol-Water Partition Coefficients by Guiding an Additive Model with Knowledge. J. Chem. Inf. Model. 47 (6) (2007)