Sunghwan Kim

Publication Activity (10 Years)

Years Active: 2011-2024
Publications (10 Years): 17

Top Topics

Arabidopsis Thaliana

Biomedical Literature

Filtering Process

Top Venues

Nucleic Acids Res.

J. Cheminformatics

Frontiers Res. Metrics Anal.

Publications

Sunghwan Kim, Bo Yu, Qingliang Li, Evan E. Bolton
PubChem synonym filtering process using crowdsourcing. J. Cheminformatics 16 (1) (2024)
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan E. Bolton
PubChem 2023 update. Nucleic Acids Res. 51 (D1) (2023)
Qingliang Li, Sunghwan Kim, Leonid Zaslavsky, Tiejun Cheng, Bo Yu, Evan E. Bolton
Resource Description Framework (RDF) Modeling of Named Entity Co-occurrences Derived from Biomedical Literature in the PubChemRDF. SWAT4HCLS (2023)
Eric W. Sayers, Evan E. Bolton, J. Rodney Brister, Kathi Canese, Jessica Chan, Donald C. Comeau, Catherine M. Farrell, Michael Feldgarden, Anna M. Fine, Kathryn Funk, Eneida Hatcher, Sivakumar Kannan, Christopher Kelly, Sunghwan Kim, William Klimke, Melissa J. Landrum, Stacy Lathrop, Zhiyong Lu, Thomas L. Madden, Adriana J. Malheiro, Aron Marchler-Bauer, Terence D. Murphy, Lon Phan, Shashikant Pujar, Sanjida H. Rangwala, Valerie A. Schneider, Tony Tse, Jiyao Wang, Jian Ye, Barton W. Trawick, Kim D. Pruitt, Stephen T. Sherry
Database resources of the National Center for Biotechnology Information in 2023. Nucleic Acids Res. 51 (D1) (2023)
Eric W. Sayers, Evan E. Bolton, J. Rodney Brister, Kathi Canese, Jessica Chan, Donald C. Comeau, Ryan Connor, Kathryn Funk, Chris Kelly, Sunghwan Kim, Tom Madej, Aron Marchler-Bauer, Christopher J. Lanczycki, Stacy Lathrop, Zhiyong Lu, Françoise Thibaud-Nissen, Terence D. Murphy, Lon Phan, Yuri Skripchenko, Tony Tse, Jiyao Wang, Rebecca Williams, Barton W. Trawick, Kim D. Pruitt, Stephen T. Sherry
Database resources of the national center for biotechnology information. Nucleic Acids Res. 50 (D1) (2022)
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan Bolton
PubChem in 2021: new data content and improved web interfaces. Nucleic Acids Res. 49 (Database-Issue) (2021)
Leonid Zaslavsky, Tiejun Cheng, Asta Gindulyte, Siqian He, Sunghwan Kim, Qingliang Li, Paul A. Thiessen, Bo Yu, Evan Bolton
Discovering and Summarizing Relationships Between Chemicals, Genes, Proteins, and Diseases in PubChem. Frontiers Res. Metrics Anal. 6 (2021)
Eric W. Sayers, Jeffrey Beck, Evan Bolton, Devon Bourexis, James R. Brister, Kathi Canese, Donald C. Comeau, Kathryn Funk, Sunghwan Kim, William Klimke, Aron Marchler-Bauer, Melissa J. Landrum, Stacy Lathrop, Zhiyong Lu, Thomas L. Madden, Nuala A. O'Leary, Lon Phan, Sanjida H. Rangwala, Valerie A. Schneider, Yuri Skripchenko, Jiyao Wang, Jian Ye, Barton W. Trawick, Kim D. Pruitt, Stephen T. Sherry
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 49 (Database-Issue) (2021)
Eric W. Sayers, Jeffrey Beck, J. Rodney Brister, Evan Bolton, Kathi Canese, Donald C. Comeau, Kathryn Funk, Anne Ketter, Sunghwan Kim, Avi Kimchi, Paul A. Kitts, Anatoliy Kuznetsov, Stacy Lathrop, Zhiyong Lu, Kelly M. McGarvey, Thomas L. Madden, Terence D. Murphy, Nuala A. O'Leary, Lon Phan, Valerie A. Schneider, Françoise Thibaud-Nissen, Barton W. Trawick, Kim D. Pruitt, James Ostell
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 48 (Database-Issue) (2020)
Eric W. Sayers, Richa Agarwala, Evan Bolton, J. Rodney Brister, Kathi Canese, Karen Clark, Ryan Connor, Nicolas Fiorini, Kathryn Funk, Timothy Hefferon, J. Bradley Holmes, Sunghwan Kim, Avi Kimchi, Paul A. Kitts, Stacy Lathrop, Zhiyong Lu, Thomas L. Madden, Aron Marchler-Bauer, Lon Phan, Valerie A. Schneider, Conrad L. Schoch, Kim D. Pruitt, James Ostell
Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 47 (Database-Issue) (2019)
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Jian Zhang, Asta Gindulyte, Evan Bolton
PUG-View: programmatic access to chemical annotations integrated in PubChem. J. Cheminformatics 11 (1) (2019)
Sunghwan Kim, Jie Chen, Tiejun Cheng, Asta Gindulyte, Jia He, Siqian He, Qingliang Li, Benjamin A. Shoemaker, Paul A. Thiessen, Bo Yu, Leonid Zaslavsky, Jian Zhang, Evan Bolton
PubChem 2019 update: improved access to chemical data. Nucleic Acids Res. 47 (Database-Issue) (2019)
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Bo Yu, Evan Bolton
An update on PUG-REST: RESTful interface for programmatic access to PubChem. Nucleic Acids Res. 46 (Webserver-Issue) (2018)
Volker Hähnke, Sunghwan Kim, Evan Bolton
PubChem chemical structure standardization. J. Cheminformatics 10 (1) (2018)
Sunghwan Kim, Paul A. Thiessen, Evan Bolton, Jie Chen, Gang Fu, Asta Gindulyte, Lianyi Han, Jane He, Siqian He, Benjamin A. Shoemaker, Jiyao Wang, Bo Yu, Jian Zhang, Stephen H. Bryant
PubChem Substance and Compound databases. Nucleic Acids Res. 44 (Database-Issue) (2016)
Sunghwan Kim, Evan Bolton, Stephen H. Bryant
Similar compounds versus similar conformers: complementarity between PubChem 2-D and 3-D neighboring sets. J. Cheminformatics 8 (1) (2016)
Sunghwan Kim, Paul A. Thiessen, Tiejun Cheng, Bo Yu, Benjamin A. Shoemaker, Jiyao Wang, Evan Bolton, Yanli Wang, Stephen H. Bryant
Literature information in PubChem: associations between PubChem records and scientific articles. J. Cheminformatics 8 (1) (2016)
Sunghwan Kim, Paul A. Thiessen, Evan Bolton, Stephen H. Bryant
PUG-SOAP and PUG-REST: web services for programmatic access to chemical information in PubChem. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Sunghwan Kim, Lianyi Han, Bo Yu, Volker Hähnke, Evan Bolton, Stephen H. Bryant
PubChem structure-activity relationship (SAR) clusters. J. Cheminformatics 7 (2015)
Sunghwan Kim, Evan Bolton, Stephen H. Bryant
PubChem3D: conformer ensemble accuracy. J. Cheminformatics 5 (2013)
Sunghwan Kim, Evan Bolton, Stephen H. Bryant
Effects of multiple conformers per compound upon 3-D similarity search and bioassay data analysis. J. Cheminformatics 4 (2012)
Evan Bolton, Sunghwan Kim, Stephen H. Bryant
PubChem3D: Similar conformers. J. Cheminformatics 3 (2011)
Sunghwan Kim, Evan Bolton, Stephen H. Bryant
PubChem3D: Biologically relevant 3-D similarity. J. Cheminformatics 3 (2011)
Sunghwan Kim, Evan Bolton, Stephen H. Bryant
PubChem3D: Shape compatibility filtering using molecular shape quadrupoles. J. Cheminformatics 3 (2011)
Evan Bolton, Sunghwan Kim, Stephen H. Bryant
PubChem3D: Conformer generation. J. Cheminformatics 3 (2011)
Evan Bolton, Sunghwan Kim, Stephen H. Bryant
PubChem3D: Diversity of shape. J. Cheminformatics 3 (2011)
Evan Bolton, Jie Chen, Sunghwan Kim, Lianyi Han, Siqian He, Wenyao Shi, Vahan Simonyan, Yan Sun, Paul A. Thiessen, Jiyao Wang, Bo Yu, Jian Zhang, Stephen H. Bryant
PubChem3D: a new resource for scientists. J. Cheminformatics 3 (2011)