Song He

Publication Activity (10 Years)

Years Active: 1996-2024
Publications (10 Years): 44

Top Topics

Ensemble Learning

Knapsack Problem

Top Venues

Briefings Bioinform.

Publications

Xiaoqi Wang, Yuqi Wen, Yixin Zhang, Chong Dai, Yaning Yang, Xiaochen Bo, Song He, Shaoliang Peng
A hierarchical attention network integrating multi-scale relationship for drug response prediction. Inf. Fusion 110 (2024)
Qiong Tan, Yuqi Wen, Yong Xu, Kunhong Liu, Song He, Xiaochen Bo
Multi-view uncertainty deep forest: An innovative deep forest equipped with uncertainty estimation for drug-induced liver injury prediction. Inf. Sci. 667 (2024)
Hongyan Ye, Yingying Song, Binyu Wang, Lianlian Wu, Song He, Xiaochen Bo, Zhongnan Zhang
HSGCL-DTA: Hybrid-scale Graph Contrastive Learning based Drug-Target Binding Affinity Prediction. ICTAI (2023)
Jihu Sun, Long Ma, Song He, Qiushi Xi, Jun Hu
Research on Student Classroom Attention Detection Based on Multi-Feature Fusion. CAIBDA (2023)
Lianlian Wu, Xiaona Ye, Yixin Zhang, Jie Gao, Zhikai Lin, Binsheng Sui, Yuqi Wen, Qingqiang Wu, Kunhong Liu, Song He, Xiaochen Bo
A Genetic Algorithm-Based Ensemble Learning Framework for Drug Combination Prediction. J. Chem. Inf. Model. 63 (12) (2023)
Binyu Wang, Yunhao Zhang, Hongyan Ye, Lianlian Wu, Song He, Xiaochen Bo, Zhongnan Zhang
Drug-target and Drug-disease Association Prediction based on Drug-target-disease Network and Multi-task Learning. BIBM (2023)
Jing Chen, Lianlian Wu, Kunhong Liu, Yong Xu, Song He, Xiaochen Bo
EDST: a decision stump based ensemble algorithm for synergistic drug combination prediction. BMC Bioinform. 24 (1) (2023)
Song He, Xin Peng, Zhiqing Yuan, Wenli Du
Contour-Context Joint Blind Image Inpainting Network for Molecular Sieve Particle Size Measurement of SEM Images. IEEE Trans. Instrum. Meas. 72 (2023)
Xinjian Chen, Chenyang Xie, Yunhao Zhang, Song He, Xiaochen Bo, Zhongnan Zhang
MoSCHG: Multi-omics Single-cell Classification based on Heterogeneous Graphs and Supervised Contrastive Learning. BIBM (2023)
Qing Li, Song He
Similarity matching of medical question based on Siamese network. BMC Medical Informatics Decis. Mak. 23 (1) (2023)
Lianlian Wu, Bowei Yan, Junshan Han, Ruijiang Li, Jian Xiao, Song He, Xiaochen Bo
TOXRIC: a comprehensive database of toxicological data and benchmarks. Nucleic Acids Res. 51 (D1) (2023)
Siyang Chen, Lianlian Wu, Yong Xu, Kunhong Liu, Song He, Xiaochen Bo
A Multi-View Learning-Based Bayesian Ruleset Extraction Algorithm For Accurate Hepatotoxicity Prediction. BIBM (2023)
Xiaojing Wu, Mingfei Han, Xinyu Song, Song He, Xiaochen Bo, Yunping Zhu
COMMO: a web server for the identification and analysis of consensus gene modules across multiple methods. Bioinform. 39 (12) (2023)
Hong Wang, Chong Dai, Yuqi Wen, Xiaoqi Wang, Wenjuan Liu, Song He, Xiaochen Bo, Shaoliang Peng
GADRP: graph convolutional networks and autoencoders for cancer drug response prediction. Briefings Bioinform. 24 (1) (2023)
Yuqi Wen, Linyi Zheng, Dongjin Leng, Chong Dai, Jing Lu, Zhongnan Zhang, Song He, Xiaochen Bo
Deep Learning-Based Multiomics Data Integration Methods for Biomedical Application. Adv. Intell. Syst. 5 (5) (2023)
Qingyu Li, Xiaochang Zhang, Lianlian Wu, Xiaochen Bo, Song He, Shengqi Wang
PLA-MoRe: A Protein-Ligand Binding Affinity Prediction Model via Comprehensive Molecular Representations. J. Chem. Inf. Model. 62 (18) (2022)
Yuting Zhong, Bowei Yan, KunHong Liu, Yong Xu, Song He, Xiaochen Bo
A Multi-View Learning-Based Rule Extraction Algorithm For Accurate Hepatotoxicity Prediction. BIBM (2022)
Dafei Xie, Song He, Lu Han, Lianlian Wu, Hai Huang, Huan Tao, Pingkun Zhou, Xunlong Shi, Hui Bai, Xiaochen Bo
Systematic optimization of host-directed therapeutic targets and preclinical validation of repositioned antiviral drugs. Briefings Bioinform. 23 (3) (2022)
Jing Wang, Qinglong Zhang, Junshan Han, Yanpeng Zhao, Caiyun Zhao, Bowei Yan, Chong Dai, Lianlian Wu, Yuqi Wen, Yixin Zhang, Dongjin Leng, Zhongming Wang, Xiaoxi Yang, Song He, Xiaochen Bo
Computational methods, databases and tools for synthetic lethality prediction. Briefings Bioinform. 23 (3) (2022)
Weiping Lin, Lianlian Wu, Yixin Zhang, Yuqi Wen, Bowei Yan, Chong Dai, Kun-Hong Liu, Song He, Xiaochen Bo
An enhanced cascade-based deep forest model for drug combination prediction. Briefings Bioinform. 23 (2) (2022)
Kanghao Shao, Yunhao Zhang, Yuqi Wen, Zhongnan Zhang, Song He, Xiaochen Bo
DTI-HETA: prediction of drug-target interactions based on GCN and GAT on heterogeneous graph. Briefings Bioinform. 23 (3) (2022)
Lianlian Wu, Yuqi Wen, Dongjin Leng, Qinglong Zhang, Chong Dai, Zhongming Wang, Ziqi Liu, Bowei Yan, Yixin Zhang, Jing Wang, Song He, Xiaochen Bo
Machine learning methods, databases and tools for drug combination prediction. Briefings Bioinform. 23 (1) (2022)
Peng Ke, Yuqi Wen, Zhongnan Zhang, Song He, Xiaochen Bo
A Metagraph-Based Model for Predicting Drug-Target Interaction on Heterogeneous Network. ICANN (1) (2021)
Yuqi Wen, Xinyu Song, Bowei Yan, Xiaoxi Yang, Lianlian Wu, Dongjin Leng, Song He, Xiaochen Bo
Multi-dimensional data integration algorithm based on random walk with restart. BMC Bioinform. 22 (1) (2021)
Lianlian Wu, Yuqi Wen, Xiaoxi Yang, Bowei Yan, Song He, Xiaochen Bo
Synthetic Lethal Interactions Prediction Based on Multiple Similarity Measures Fusion. J. Comput. Sci. Technol. 36 (2) (2021)
Jie Yang, Song He, Zhongnan Zhang, Xiaochen Bo
NegStacking: Drug-Target Interaction Prediction Based on Ensemble Learning and Logistic Regression. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (6) (2021)
Song He, Xinyu Song, Xiaoxi Yang, Jijun Yu, Yuqi Wen, Lianlian Wu, Bowei Yan, Jiannan Feng, Xiaochen Bo
COMSUC: A web server for the identification of consensus molecular subtypes of cancer based on multiple methods and multi-omics data. PLoS Comput. Biol. 17 (3) (2021)
Haihua Wang, Song He, Kai Xiao, Yu-Long Jiang, Jing Wan
Impact of Evaporated AuNP Thickness on Pseudo-MOS and Its Application in Direct MicroRNA-375 Detection. ASICON (2021)
Yihua Ye, Yuxin Chen, Zhongnan Zhang, Yuqi Wen, Song He, Xiaochen Bo
Drug-target interaction prediction based on nonnegative and self-representative matrix factorization. BIBM (2021)
Song He, Wei Li
An Adaptive Search Algorithm with Scatter and Tabu Strategy for Multidimensional Knapsack Problem. ISICA (2021)
Kanghao Shao, Zhongnan Zhang, Song He, Xiaochen Bo
DTIGCCN: Prediction of drug-target interactions based on GCN and CNN. ICTAI (2020)
Song He, Yuqi Wen, Xiaoxi Yang, Zhen Liu, Xinyu Song, Xin Huang, Xiaochen Bo
PIMD: An Integrative Approach for Drug Repositioning Using Multiple Characterization Fusion. Genom. Proteom. Bioinform. 18 (5) (2020)
Lingwei Xie, Song He, Zhongnan Zhang, Kunhui Lin, Xiaochen Bo, Shu Yang, Boyuan Feng, Kun Wan, Kang Yang, Jie Yang, Yufei Ding
Domain-adversarial multi-task framework for novel therapeutic property prediction of compounds. Bioinform. 36 (9) (2020)
Song He, Xingwu Chen, Mao-Hsiung Hung, Xiaoyong Chen, Yufeng Ji
Steering Angle Measurement of UAV Navigation Based on Improved Image Processing. J. Inf. Hiding Multim. Signal Process. 10 (2) (2019)
Lingwei Xie, Song He, Shu Yang, Boyuan Feng, Kun Wan, Zhongnan Zhang, Xiaochen Bo, Yufei Ding
Domain-Adversarial Multi-Task Framework for Novel Therapeutic Property Prediction of Compounds. CoRR (2018)
Xiaolong Shen, Song He, Minquan Fang, Yuqi Wen, Xiaochen Bo, Yong Dou
paraSNF: An Parallel Approach for Large-Scale Similarity Network Fusion. ACA (2018)
Emre Erturk, Song He
Study on A High-integrated Cloud-Based Customer Relationship Management System. CoRR (2018)
Xiaoping Zheng, Song He, Xinyu Song, Zhongnan Zhang, Xiaochen Bo
DTI-RCNN: New Efficient Hybrid Neural Network Model to Predict Drug-Target Interactions. ICANN (1) (2018)
Kang Yang, Zhongnan Zhang, Song He, Xiaochen Bo
Prediction of DTIs for high-dimensional and class-imbalanced data based on CGAN. BIBM (2018)
Brian Blank, Erika Lunceford, John Morik, Song He, Madhusudan Rana, Pavithran Rajendran, Gnanadeeban Gnanapandithan, Katherine Lajoie, Boris Kats, Madangopal Revoor, Victor O'Laughlen, Prasad Lakshminarsimha Kompella
BNY Mellon Optimization Reduces Intraday Credit Risk by $1.4 Trillion. Interfaces 47 (1) (2017)
Wenliang Chen, Song He
Application of data mining technology in TCM diagnosis and treatment. BIBM (2017)
Wenjian Xu, Yang Cao, Ziwei Xie, Haochen He, Song He, Hao Hong, Xiaochen Bo, Fei Li
NFPscanner: a webtool for knowledge-based deciphering of biomedical networks. BMC Bioinform. 18 (1) (2017)
Lingwei Xie, Zhongnan Zhang, Song He, Xiaochen Bo, Xinyu Song
Drug - target interaction prediction with a deep-learning-based model. BIBM (2017)
Song He, Haochen He, Wenjian Xu, Xin Huang, Shuai Jiang, Fei Li, Fuchu He, Xiaochen Bo
ICM: a web server for integrated clustering of multi-dimensional biomedical data. Nucleic Acids Res. 44 (Webserver-Issue) (2016)
Song He, Can Zhang, Wei Guo, Lidong Zhai
Worms Propagation Modeling and Analysis in Big Data Environment. Int. J. Distributed Sens. Networks 11 (2015)
Li Anying, Chen Ke, Song He, Lei Yu
The Industry Data Analysis Processing Model Design: The Regional Health Disease Trend Analysis Model. CCBD (2014)
Song He, Lingge Jiang, Chen He
A novel secondary user assisted relay mechanism in cognitive radio networks with multiple primary users. GLOBECOM (2012)
Yanling Zhao, Heyu Zhang, Bing Chen, Song He
Optimization of landscape ecological pattern in abandoned mines based on GIS. Geoinformatics (2010)
Song He, Huiyou Chang, Qing Wang
Component Library-Based ERP Software Development Methodology. IESA (2009)
Panxiang Zhang, Song He, Qing Wang, Huiyou Chang
BSMDR: A B/S UI Framework Based on MDR. IESA (2008)
Song He
Stabilizing the Richardson Algorithm by Controlling Chaos CoRR (1996)