Yaning Yang

Publication Activity (10 Years)

Years Active: 2003-2024
Publications (10 Years): 29

Top Topics

Association Studies

Reinforcement Learning

Gene Expression

Top Venues

Comput. Biol. Chem.

Publications

Xiao Du, Yutong Ye, Pengyu Zhang, Yaning Yang, Mingsong Chen, Ting Wang
Situation-Dependent Causal Influence-Based Cooperative Multi-Agent Reinforcement Learning. AAAI (2024)
Fengrong Liu, Yaning Yang, Xu Steven Xu, Min Yuan
MESBC: A novel mutually exclusive spectral biclustering method for cancer subtyping. Comput. Biol. Chem. 109 (2024)
Xiaoqi Wang, Yuqi Wen, Yixin Zhang, Chong Dai, Yaning Yang, Xiaochen Bo, Song He, Shaoliang Peng
A hierarchical attention network integrating multi-scale relationship for drug response prediction. Inf. Fusion 110 (2024)
Minghua Zhao, Min Yuan, Yaning Yang, Steven X. Xu
CPGL: Prediction of Compound-Protein Interaction by Integrating Graph Attention Network With Long Short-Term Memory Neural Network. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (3) (2023)
Yutong Ye, Zhiwei Ling, Yaning Yang, Xian Wei, Cheng Chen, Su Chen, Mingsong Chen
Brief Industry Paper: RTLight: Digital Twin-Based Real-Time Federated Traffic Signal Control. RTSS (2023)
Xiaoqi Wang, Yingjie Cheng, Yaning Yang, Yue Yu, Fei Li, Shaoliang Peng
Multitask joint strategies of self-supervised representation learning on biomedical networks for drug discovery. Nat. Mac. Intell. 5 (4) (2023)
Minghua Zhao, Steven X. Xu, Yaning Yang, Min Yuan
GGNpTCR: A Generative Graph Structure Neural Network for Predicting Immunogenic Peptides for T-cell Immune Response. J. Chem. Inf. Model. 63 (23) (2023)
Xiao Du, Yutong Ye, Pengyu Zhang, Yaning Yang, Mingsong Chen, Ting Wang
Situation-Dependent Causal Influence-Based Cooperative Multi-agent Reinforcement Learning. CoRR (2023)
Yi Li, Yaning Yang, Xu Steven Xu, Min Yuan, Alzheimer's Disease Neuroimaging Initiative
Bias correction for multiple covariate analysis using empirical bayesian estimation in mixed-effects models for longitudinal data. Comput. Biol. Chem. 99 (2022)
Bin Xin, Yaning Yang, Xiaolan Xie, Jiandong Shang, Zhengyu Liu, Shaoliang Peng
Detecting and Classifying Nuclei Using Multi-Scale Fully Convolutional Network. J. Comput. Biol. 29 (10) (2022)
Yaning Yang, Xiaoqi Wang, Deshan Zhou, Dong-Qing Wei, Shaoliang Peng
SVPath: an accurate pipeline for predicting the pathogenicity of human exon structural variants. Briefings Bioinform. 23 (2) (2022)
Weiming Xiang, Yingbo Cui, Yaning Yang, Ang Zhang, Boya Ji, Shaoliang Peng
MSVF: Multi-task Structure Variation Filter with Transfer Learning in High-throughput Sequencing. BIBM (2022)
Xiaoqi Wang, Yingjie Cheng, Yaning Yang, Fei Li, Shaoliang Peng
Multi-task Joint Strategies of Self-supervised Representation Learning on Biomedical Networks for Drug Discovery. CoRR (2022)
Min Yuan, Xu Steven Xu, Yaning Yang, Yinsheng Zhou, Yi Li, Jinfeng Xu, Jose Pinheiro
SCEBE: an efficient and scalable algorithm for genome-wide association studies on longitudinal outcomes with mixed-effects modeling. Briefings Bioinform. 22 (3) (2021)
Yaning Yang, Xiaoqi Wang, Ying Xu, Chao Yang, Bin Jiang, Shaoliang Peng
ParaPindel: a scalable coordinated parallel detection framework for human genome-wide structural variation. BIBM (2021)
Shaoliang Peng, Yaning Yang, Wei Liu, Fei Li, Xiangke Liao
Discriminant Projection Shared Dictionary Learning for Classification of Tumors Using Gene Expression Data. IEEE ACM Trans. Comput. Biol. Bioinform. 18 (4) (2021)
Xiaoqi Wang, Yaning Yang, Kenli Li, Wentao Li, Fei Li, Shaoliang Peng
BioERP: biomedical heterogeneous network-based self-supervised representation learning approach for entity relationship predictions. Bioinform. 37 (24) (2021)
Wentian Li, Andrew Shih, Yun Freudenberg-Hua, Wen Fury, Yaning Yang
 . Comput. Biol. Chem. 92 (2021)
Bin Xin, Yaning Yang, Dongqing Wei, Shaoliang Peng
CFCN: A Multi-scale Fully Convolutional Network with Dilated Convolution for Nuclei Classification and Localization. ISBRA (2021)
Shaoliang Peng, Lei Zhang, Yaning Yang, Wei Liu, Fei Li, Hao Hong, Kenli Li, Shulin Wang
A deep metric learning algorithm for similarity measure of the gene expression profile. HealthCom (2020)
Huang Xu, Xiang Li, Yaning Yang, Yi Li, Jose Pinheiro, Kate Sasser, Hisham Hamadeh, Xu Steven, Min Yuan
High-throughput and efficient multilocus genome-wide association study on longitudinal outcomes. Bioinform. 36 (10) (2020)
Yaning Yang, Xiaoqi Wang, Shaoliang Peng
A Dynamic Protection Mechanism for GPU Memory Overflow. NPC (2020)
Rui Liu, Min Yuan, Huang Xu, Pinzhong Chen, Xu Steven Xu, Yaning Yang
Adaptive weighted sum tests via LASSO method in multi-locus family-based association analysis. Comput. Biol. Chem. 88 (2020)
Shaoliang Peng, Hao Huang, Minxia Cheng, Yaning Yang, Fei Li
Efficiently recognition of vaginal micro-ecological environment based on Convolutional Neural Network. HealthCom (2020)
Zhe Sun, Shaoliang Peng, Yaning Yang, Xiaoqi Wang, Fei Li
A General Fine-tuned Transfer Learning Model for Predicting Clinical Task Acrossing Diverse EHRs Datasets. BIBM (2019)
Yinsheng Zhou, Han Zhang, Yaning Yang
CSHAP: efficient haplotype frequency estimation based on sparse representation. Bioinform. 35 (16) (2019)
Ming Gong, Min Xie, Yaning Yang
Reliability assessment of system under a generalized run shock model. J. Appl. Probab. 55 (4) (2018)
Diya Wang, Zhe Su, Qiang Su, Xinyu Zhang, Zhen Qu, Na Wang, Yujin Zong, Yaning Yang, Mingxi Wan
Evaluation of accuracy of automatic out-of-plane respiratory gating for DCEUS-based quantification using principal component analysis. Comput. Medical Imaging Graph. 70 (2018)
Wentian Li, Jane E. Cerise, Yaning Yang, Henry Han
Application of t-SNE to human genetic data. J. Bioinform. Comput. Biol. 15 (4) (2017)
Wentian Li, Jan Freudenberg, Young Ju Suh, Yaning Yang
Using volcano plots and regularized-chi statistics in genetic association studies. Comput. Biol. Chem. 48 (2014)
Hongyan Fang, Bo Hou, Qi Wang, Yaning Yang
Rare variants analysis by risk-based variable-threshold method. Comput. Biol. Chem. 46 (2013)
Baochun Wu, Min Li, Yaning Yang, Weiwei Zhang
ECG acquisition circuit design based on C8051F330. BHI (2012)
Yaning Yang, Elaine F. Remmers, Chukwuma B. Ogunwole, Daniel L. Kastner, Peter K. Gregersen, Wentian Li
Effective sample size: Quick estimation of the effect of related samples in genetic case-control association analyses. Comput. Biol. Chem. 35 (1) (2011)
Min Li, Jiyin Zhao, Xingwen Chen, Yaning Yang
Research and Design of Direct Type Automobile Tire Burst Early-Warning System. CSEE (2) (2011)
Yanqiu Cui, Yaning Yang, Tao Zhang
Computer-aided design of lead compensator of control system via MATLAB. EMEIT (2011)
Xing Hua, Han Zhang, Hong Zhang, Yaning Yang, Anthony Y. C. Kuk
Testing multiple gene interactions by the ordered combinatorial partitioning method in case-control studies. Bioinform. 26 (15) (2010)
Anthony Y. C. Kuk, Jinfeng Xu, Yaning Yang
A study of the efficiency of pooling in haplotype estimation. Bioinform. 26 (20) (2010)
Anthony Y. C. Kuk, Han Zhang, Yaning Yang
Computationally feasible estimation of haplotype frequencies from pooled DNA with and without Hardy-Weinberg equilibrium. Bioinform. 25 (3) (2009)
Wentian Li, Yaning Yang
Fractal Characterizations of Max Statistical Distribution in Genetic Association Studies. Adv. Complex Syst. 12 (4-5) (2009)
Jan Freudenberg, Mingyi Wang, Yaning Yang, Wentian Li
Partial correlation analysis indicates causal relationships between GC-content, exon density and recombination rate in the human genome. BMC Bioinform. 10 (S-1) (2009)
Wentian Li, Young Ju Suh, Yaning Yang
Exploring case-control genetic association tests using phase diagrams. Comput. Biol. Chem. 32 (6) (2008)
Han Zhang, Hsin-Chou Yang, Yaning Yang
PoooL: an efficient method for estimating haplotype frequencies from large DNA pools. Bioinform. 24 (17) (2008)
Berna Yazici, Özlem Alpu, Yaning Yang
Comparison of Goodness-of-Fit Measures in Probit Regression Model. Commun. Stat. Simul. Comput. 36 (5) (2007)
Zhanfeng Wang, Yuan-chin Ivan Chang, Zhiliang Ying, Liang Zhu, Yaning Yang
A parsimonious threshold-independent protein feature selection method through the area under receiver operating characteristic curve. Bioinform. 23 (20) (2007)
Jinfeng Xu, Yaning Yang, Jürg Ott
Survival analysis of microarray expression data by transformation models. Comput. Biol. Chem. 29 (2) (2005)
Yaning Yang, Josephine Hoh, Clemens Broger, Martin Neeb, Joanne Edington, Klaus Lindpaintner, Jürg Ott
Statistical Methods for Analyzing Microarray Feature Data with Replications. J. Comput. Biol. 10 (2) (2003)
Mark A. Levenstien, Yaning Yang, Jürg Ott
Statistical significance for hierarchical clustering in genetic association and microarray expression studies. BMC Bioinform. 4 (2003)