Sarah Cohen Boulakia

Publication Activity (10 Years)

Years Active: 2004-2018
Publications (10 Years): 6

Top Topics

Coronary Heart Disease

Scientific Workflows

Query Reformulation

Rank Aggregation

Top Venues

Future Gener. Comput. Syst.

Proc. VLDB Endow.

Publications

Christophe Pradal, Sarah Cohen Boulakia, Gaëtan Heidsieck, Esther Pacitti, François Tardieu, Patrick Valduriez
Distributed Management of Scientific Workflows for High-Throughput Plant Phenotyping. ERCIM News 2018 (113) (2018)
Karima Rafes, Serge Abiteboul, Sarah Cohen Boulakia, Bastien Rance
Designing Scientific SPARQL Queries Using Autocompletion by Snippets. eScience (2018)
Sarah Cohen Boulakia, Khalid Belhajjame, Olivier Collin, Jérôme Chopard, Christine Froidevaux, Alban Gaignard, Konrad Hinsen, Pierre Larmande, Yvan Le Bras, Frédéric Lemoine, Fabien Mareuil, Hervé Ménager, Christophe Pradal, Christophe Blanchet
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities. Future Gener. Comput. Syst. 75 (2017)
Christophe Pradal, Simon Artzet, Jérôme Chopard, Dimitri Dupuis, Christian Fournier, Michael Mielewczik, Vincent Nègre, Pascal Neveu, Didier Parigot, Patrick Valduriez, Sarah Cohen Boulakia
InfraPhenoGrid: A scientific workflow infrastructure for plant phenomics on the Grid. Future Gener. Comput. Syst. 67 (2017)
Johannes Starlinger, Sarah Cohen Boulakia, Sanjeev Khanna, Susan B. Davidson, Ulf Leser
Effective and efficient similarity search in scientific workflow repositories. Future Gener. Comput. Syst. 56 (2016)
Vincent Henry, Arnaud Ferré, Christine Froidevaux, Anne Goelzer, Vincent Fromion, Sarah Cohen Boulakia, Sandra Dérozier, Marc Dinh, Ghislain Fiévet, Stephan Fischer, Jean-François Gibrat, Valentin Loux, Sabine Peres
Représentation systémique multi-échelle des processus biologiques de la bactérie. IC (2016)
Jean-Baptiste Escudié, Anne-Sophie Jannot, Eric Zapletal, Sarah Cohen Boulakia, Georgia Malamut, Anita Burgun, Bastien Rance
Reviewing 741 patients records in two hours with FASTVISU. AMIA (2015)
Christophe Pradal, Christian Fournier, Patrick Valduriez, Sarah Cohen Boulakia
OpenAlea: scientific workflows combining data analysis and simulation. SSDBM (2015)
Bryan Brancotte, Bo Yang, Guillaume Blin, Sarah Cohen Boulakia, Alain Denise, Sylvie Hamel
Rank aggregation with ties: Experiments and Analysis. Proc. VLDB Endow. 8 (11) (2015)
Bryan Brancotte, Bastien Rance, Alain Denise, Sarah Cohen Boulakia
ConQuR-Bio: Consensus Ranking with Query Reformulation for Biological Data. DILS (2014)
Johannes Starlinger, Sarah Cohen Boulakia, Sanjeev Khanna, Susan B. Davidson, Ulf Leser
Layer Decomposition: An Effective Structure-Based Approach for Scientific Workflow Similarity. eScience (2014)
Johannes Starlinger, Bryan Brancotte, Sarah Cohen Boulakia, Ulf Leser
Similarity Search for Scientific Workflows. Proc. VLDB Endow. 7 (12) (2014)
Jiuqiang Chen, Sarah Cohen Boulakia, Christine Froidevaux, Carole A. Goble, Paolo Missier, Alan R. Williams
DistillFlow: removing redundancy in scientific workflows. SSDBM (2014)
Sarah Cohen Boulakia, Jiuqiang Chen, Paolo Missier, Carole A. Goble, Alan R. Williams, Christine Froidevaux
Distilling structure in Taverna scientific workflows: a refactoring approach. BMC Bioinform. 15 (S-1) (2014)
Johannes Starlinger, Sarah Cohen Boulakia, Ulf Leser
(Re)Use in Public Scientific Workflow Repositories. SSDBM (2012)
Sarah Cohen Boulakia, Christine Froidevaux, Jiuqiang Chen
Scientific workflow rewriting while preserving provenance. eScience (2012)
Sarah Cohen Boulakia, Ulf Leser
Search, adapt, and reuse: the future of scientific workflows. SIGMOD Rec. 40 (2) (2011)
Bryan Brancotte, Anne Biton, Isabelle Bernard-Pierrot, François Radvanyi, Fabien Reyal, Sarah Cohen Boulakia
Gene List significance at-a-glance with GeneValorization. Bioinform. 27 (8) (2011)
Sarah Cohen Boulakia, Alain Denise, Sylvie Hamel
Using Medians to Generate Consensus Rankings for Biological Data. SSDBM (2011)
Sarah Cohen Boulakia, Ulf Leser
Next generation data integration for Life Sciences. ICDE (2011)
Sarah Cohen Boulakia, Kevin Masini
BioBrowsing: Making the Most of the Data Available in Entrez. SSDBM (2009)
Susan B. Davidson, Yi Chen, Peng Sun, Sarah Cohen Boulakia
On User Views in Scientific Workflow Systems. SWPM (2009)
Zhuowei Bao, Sarah Cohen Boulakia, Susan B. Davidson, Pierrick Girard
PDiffView: Viewing the Difference in Provenance of Workflow Results. Proc. VLDB Endow. 2 (2) (2009)
Zhuowei Bao, Sarah Cohen Boulakia, Susan B. Davidson, Anat Eyal, Sanjeev Khanna
Differencing Provenance in Scientific Workflows. ICDE (2009)
Sarah Cohen Boulakia, Olivier Biton, Shirley Cohen, Susan B. Davidson
Addressing the provenance challenge using ZOOM. Concurr. Comput. Pract. Exp. 20 (5) (2008)
Luc Moreau, Bertram Ludäscher, Ilkay Altintas, Roger S. Barga, Shawn Bowers, Steven P. Callahan, George Chin Jr., Ben Clifford, Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson, Ewa Deelman, Luciano A. Digiampietri, Ian T. Foster, Juliana Freire, James Frew, Joe Futrelle, Tara Gibson, Yolanda Gil, Carole A. Goble, Jennifer Golbeck, Paul Groth, David A. Holland, Sheng Jiang, Jihie Kim, David Koop, Ales Krenek, Timothy M. McPhillips, Gaurang Mehta, Simon Miles, Dominic Metzger, Steve Munroe, Jim Myers, Beth Plale, Norbert Podhorszki, Varun Ratnakar, Emanuele Santos, Carlos Eduardo Scheidegger, Karen Schuchardt, Margo I. Seltzer, Yogesh L. Simmhan, Cláudio T. Silva, Peter Slaughter, Eric G. Stephan, Robert Stevens, Daniele Turi, Huy T. Vo, Michael Wilde, Jun Zhao, Yong Zhao
Special Issue: The First Provenance Challenge. Concurr. Comput. Pract. Exp. 20 (5) (2008)
Amos Bairoch, Sarah Cohen Boulakia, Christine Froidevaux
Review of the selected proceedings of the Fifth International Workshop on Data Integration in the Life Sciences 2008. BMC Bioinform. 9 (S-8) (2008)
Olivier Biton, Sarah Cohen Boulakia, Susan B. Davidson, Carmem S. Hara
Querying and Managing Provenance through User Views in Scientific Workflows. ICDE (2008)
Olivier Biton, Sarah Cohen Boulakia, Susan B. Davidson
Zoom*UserViews: Querying Relevant Provenance in Workflow Systems. VLDB (2007)
Sarah Cohen Boulakia, Olivier Biton, Susan B. Davidson, Christine Froidevaux
BioGuideSRS: querying multiple sources with a user-centric perspective. Bioinform. 23 (10) (2007)
Susan B. Davidson, Sarah Cohen Boulakia, Anat Eyal, Bertram Ludäscher, Timothy M. McPhillips, Shawn Bowers, Manish Kumar Anand, Juliana Freire
Provenance in Scientific Workflow Systems. IEEE Data Eng. Bull. 30 (4) (2007)
Sarah Cohen Boulakia, Susan B. Davidson, Christine Froidevaux, Zoé Lacroix, Maria-Esther Vidal
Path-based Systems to Guide Scientists in the Maze of Biological Data Sources. J. Bioinform. Comput. Biol. 4 (5) (2006)
Sarah Cohen Boulakia, Christine Froidevaux, Emmanuel Pietriga
Selecting Biological Data Sources and Tools with XPR, a Path Language for RDF. Pacific Symposium on Biocomputing (2006)
Shirley Cohen, Sarah Cohen Boulakia, Susan B. Davidson
Towards a Model of Provenance and User Views in Scientific Workflows. DILS (2006)
Sarah Cohen Boulakia, Susan B. Davidson, Christine Froidevaux
A User-Centric Framework for Accessing Biological Sources and Tools. DILS (2005)
Sarah Cohen Boulakia, Christine Froidevaux, Séverine Lair
Interrogation de sources biomédicales : prise en compte des préférences de l'utilisateur. EGC (2004)
Alain Bidault, Sarah Cohen Boulakia, Christine Froidevaux
Preferences for Queries in a Mediator Approach. ECAI (2004)
Sarah Cohen Boulakia, Séverine Lair, Nicolas Stransky, Stéphane Graziani, François Radvanyi, Emmanuel Barillot, Christine Froidevaux
Selecting biomedical data sources according to user preferences. ISMB/ECCB (Supplement of Bioinformatics) (2004)