Pierre Larmande

ORCID

Publication Activity (10 Years)

Years Active: 2006-2023
Publications (10 Years): 19

Top Venues

Bioinform.

SWAT4LS

Database J. Biol. Databases Curation

Montpellier 2 University, France (PHD)

Education History

Montpellier 2 University, France

PHD

Publications

Pierre Larmande, Bertrand Pitollat, Ndomassi Tando, Yann Pomie, Bill Happi, Valentin Guignon, Manuel Ruiz
AgroLD: a Knowledge Graph for the Plant Sciences. SWAT4HCLS (2023)
Bill Happi, Géraud Fokou Pelap, Danai Symeonidou, Pierre Larmande
DLinker results for OAEI 2022. OM@ISWC (2022)
Pierre Larmande, Gildas Tagny Ngompé, Manuel Ruiz
AgroLD : une base de connaissances pour l'étude du phénome des plantes cultivées. EGC (2021)
Pierre Larmande, Konstantin Todorov
AgroLD: A Knowledge Graph for the Plant Sciences. ISWC (2021)
Quan Do, Bich Hai Ho, Pierre Larmande
PyRice: a Python package for querying Oryza sativa databases. Bioinform. 37 (7) (2021)
Quan Do, Pierre Larmande
Candidate gene prioritization using graph embedding. RIVF (2020)
Peter Selby, Rafael Abbeloos, Jan Erik Backlund, Martin Basterrechea Salido, Guillaume Bauchet, Omar E. Benites-Alfaro, Clayton L. Birkett, Viana C. Calaminos, Pierre Carceller, Guillaume Cornut, Bruno Vasques Costa, Jeremy D. Edwards, Richard Finkers, Star Yanxin Gao, Mehmood Ghaffar, Philip Glaser, Valentin Guignon, Puthick Hok, Andrzej Kilian, Patrick König, Jack Elendil B. Lagare, Matthias Lange, Marie-Angélique Laporte, Pierre Larmande, David S. LeBauer, David A Lyon, David F. Marshall, Dave Matthews, Iain Milne, Naymesh Mistry, Nicolas Morales, Lukas A. Mueller, Pascal Neveu, Evangelia Papoutsoglou, Brian Pearce, Ivan Perez-Masias, Cyril Pommier, Ricardo H. Ramirez-Gonzalez, Abhishek Rathore, Angel Manica Raquel, Sebastian Raubach, Trevor Rife, Kelly Robbins, Mathieu Rouard, Chaitanya Sarma, Uwe Scholz, Guilhem Sempéré, Paul D. Shaw, Reinhard Simon, Nahuel Soldevilla, Gordon Stephen, Qi Sun, Clarysabel Tovar, Grzegorz Uszynski, Maikel Verouden, The BrAPI consortium
BrAPI - an application programming interface for plant breeding applications. Bioinform. 35 (20) (2019)
Yaw Nti-Addae, Dave Matthews, Victor Jun M. Ulat, Raza Syed, Guilhem Sempéré, Adrien Pétel, Jon Renner, Pierre Larmande, Valentin Guignon, Elizabeth Jones, Kelly Robbins
Benchmarking database systems for Genomic Selection implementation. Database J. Biol. Databases Curation 2019 (2019)
Pierre Larmande, Gildas Tagny Ngompé, Manuel Ruiz
AgroLD: un graphe de connaissances pour la caractérisation des mécanismes moléculaires complexes impactant le phénome des plantes. IC (2019)
Armin Scheben, Chon-Kit Kenneth Chan, Locedie Mansueto, Ramil Mauleon, Pierre Larmande, Nickolai Alexandrov, Rod A. Wing, Kenneth L. McNally, Hadi Quesneville, David Edwards
Progress in single-access information systems for wheat and rice crop improvement. Briefings Bioinform. 20 (2) (2019)
Lisa C. Harper, Jacqueline D. Campbell, Ethalinda K. S. Cannon, Sook Jung, Monica Poelchau, Ramona L. Walls, Carson M. Andorf, Elizabeth Arnaud, Tanya Z. Berardini, Clayton L. Birkett, Steven B. Cannon, James D. Carson, Bradford Condon, Laurel Cooper, Nathan A. Dunn, Christine G. Elsik, Andrew Farmer, Stephen P. Ficklin, David Grant, Emily S. Grau, Nic Herndon, Zhi-Liang Hu, Jodi L. Humann, Pankaj Jaiswal, Clément Jonquet, Marie-Angélique Laporte, Pierre Larmande, Gerard R. Lazo, Fiona McCarthy, Naama Menda, Christopher J. Mungall, Monica C. Munoz-Torres, Sushma Naithani, Rex T. Nelson, Daureen Nesdill, Carissa A. Park, James M. Reecy, Leonore Reiser, Lacey-Anne Sanderson, Taner Z. Sen, Margaret Staton, Sabarinath Subramaniam, Marcela Karey Tello-Ruiz, Victor Unda, Deepak R. Unni, Liya Wang, Doreen Ware, Jill L. Wegrzyn, Jason Williams, Margaret Woodhouse, Jing Yu, Doreen Main
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. Database J. Biol. Databases Curation 2018 (2018)
Clément Jonquet, Anne Toulet, Elizabeth Arnaud, Sophie Aubin, Esther Dzalé Yeumo Kaboré, Vincent Emonet, John Graybeal, Marie-Angélique Laporte, Mark A. Musen, Valeria Pesce, Pierre Larmande
AgroPortal: A vocabulary and ontology repository for agronomy. Comput. Electron. Agric. 144 (2018)
Huy Do, Khoat Than, Pierre Larmande
Evaluating Named-Entity Recognition Approaches in Plant Molecular Biology. MIWAI (2018)
Sarah Cohen Boulakia, Khalid Belhajjame, Olivier Collin, Jérôme Chopard, Christine Froidevaux, Alban Gaignard, Konrad Hinsen, Pierre Larmande, Yvan Le Bras, Frédéric Lemoine, Fabien Mareuil, Hervé Ménager, Christophe Pradal, Christophe Blanchet
Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities. Future Gener. Comput. Syst. 75 (2017)
Imène Chentli, Pierre Larmande, Konstantin Todorov
Construction d'un gold standard pour des données agronomiques. IC (2016)
Stella Zevio, Nordine El Hassouni, Manuel Ruiz, Pierre Larmande
AgroLD Indexing Tools with Ontological Annotations. SWAT4LS (2016)
L. E. Ngoc Luyen, Anne Tireau, Aravind Venkatesan, Pascal Neveu, Pierre Larmande
Development of a knowledge system for Big Data: Case study to plant phenotyping data. WIMS (2016)
Clément Jonquet, Anne Toulet, Elizabeth Arnaud, Sophie Aubin, Esther Dzalé Yeumo Kaboré, Vincent Emonet, John Graybeal, Mark A. Musen, Cyril Pommier, Pierre Larmande
Reusing the NCBO BioPortal Technology for Agronomy to Build AgroPortal. ICBO/BioCreative (2016)
Gildas Tagny Ngompé, Aravind Venkatesan, Nordine El Hassouni, Manuel Ruiz, Pierre Larmande
AgroLD APIAgroLD API. Une architecture orientée services pour l'extraction de connaissances dans la base de données liées AgroLD. Ingénierie des Systèmes d Inf. 21 (5-6) (2016)
Aravind Venkatesan, Nordine El Hassouni, Florian Philippe, Cyril Pommier, Hadi Quesneville, Manuel Ruiz, Pierre Larmande
Exposing French Agronomic Resources as Linked Open Data. SWAT4LS (2015)
Julien Wollbrett, Pierre Larmande, Frédéric de Lamotte, Manuel Ruiz
Clever generation of rich SPARQL queries from annotated relational schema: application to Semantic Web Service creation for biological databases. BMC Bioinform. 14 (2013)
Julien Wollbrett, Pierre Larmande, Manuel Ruiz
Semi-automatic Generation of Semantic Web Services for Relational Biological Databases. SWAT4LS (2012)
Gaëtan Droc, Christophe Périn, Sébastien Fromentin, Pierre Larmande
OryGenesDB 2008 update: database interoperability for functional genomics of rice. Nucleic Acids Res. 37 (Database-Issue) (2009)
Pierre Larmande, Céline Gay, Mathias Lorieux, Christophe Périn, Matthieu Bouniol, Gaëtan Droc, Christophe Sallaud, Pascual Perez, Isabelle Barnola, Corinne Biderre-Petit, Jérôme Martin, Jean Benoît Morel, Alexander A. T. Johnson, Fabienne Bourgis, Alain Ghesquière, Manuel Ruiz, Brigitte Courtois, Emmanuel Guiderdoni
, a phenotypic mutant database for the Génoplante rice insertion line library. Nucleic Acids Res. 36 (Database-Issue) (2008)
Gaëtan Droc, Manuel Ruiz, Pierre Larmande, Andy Pereira, P. Piffanelli, Jean Benoît Morel, Anne Dievart, Brigitte Courtois, Emmanuel Guiderdoni, Christophe Périn
OryGenesDB: a database for rice reverse genetics. Nucleic Acids Res. 34 (Database-Issue) (2006)
Pierre Larmande, Christine Tranchant-Dubreuil, L. Regnier, Isabelle Mougenot, Thérèse Libourel
Integration of Data Sources for Plant Genomics. ICEIS (1) (2006)

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Publication Activity (10 Years)

Top Topics

Top Venues

Pierre Larmande