Robert Bossy

Publication Activity (10 Years)

Years Active: 2001-2024
Publications (10 Years): 19

Top Topics

Arabidopsis Thaliana

Annotated Corpus

Top Venues

BioNLP (Shared Task)

Database J. Biol. Databases Curation

Publications

Claire Nédellec, Clara Sauvion, Robert Bossy, Mariya Borovikova, Louise Deléger
Taec: a Manually annotated text dataset for trait and phenotype extraction and entity linking in wheat breeding literature. CoRR (2024)
Mariya Borovikova, Arnaud Ferré, Robert Bossy, Mathieu Roche, Claire Nédellec
Semantically-Informed Domain Adaptation for Named Entity Recognition. ISMIS (2024)
Mariya Borovikova, Arnaud Ferré, Robert Bossy, Mathieu Roche, Claire Nédellec
Could KeyWord Masking Strategy Improve Language Model? NLDB (2023)
Florence Amardeilh, Sophie Aubin, Stephan Bernard, Sonia Bravo, Robert Bossy, Catherine Faron, Franck Michel, Juliette Raphel, Catherine Roussey
Combining different points of view on plant descriptions: mapping agricultural plant roles and biological taxa. Frontiers Artif. Intell. 6 (2023)
Anfu Tang, Robert Bossy, Louise Deléger, Claire Nédellec, Pierre Zweigenbaum
Exploitation de plongements de graphes pour l'extraction de relations biomédicales. CORIA-TALN (1) (2023)
Anfu Tang, Louise Deléger, Robert Bossy, Pierre Zweigenbaum, Claire Nédellec
Do syntactic trees enhance Bidirectional Encoder Representations from Transformers (BERT) models for chemical-drug relation extraction? Database J. Biol. Databases Curation 2022 (2022) (2022)
Anna Chepaikina, Robert Bossy, Catherine Roussey, Stephan Bernard
Thesaurus Enrichment via Coordination Extraction. MTSR (2022)
Anfu Tang, Louise Deléger, Robert Bossy, Pierre Zweigenbaum, Claire Nédellec
Does constituency analysis enhance domain-specific pre-trained BERT models for relation extraction? CoRR (2021)
Anfu Tang, Claire Nédellec, Pierre Zweigenbaum, Louise Deléger, Robert Bossy
Global alignment for relation extraction in Microbiology. CoRR (2021)
Arnaud Ferré, Robert Bossy, Mouhamadou Ba, Louise Deléger, Thomas Lavergne, Pierre Zweigenbaum, Claire Nédellec
Handling Entity Normalization with no Annotated Corpus: Weakly Supervised Methods Based on Distributional Representation and Ontological Information. LREC (2020)
Arnaud Ferré, Louise Deléger, Robert Bossy, Pierre Zweigenbaum, Claire Nédellec
C-Norm: a neural approach to few-shot entity normalization. BMC Bioinform. (23) (2020)
Claire Nédellec, Wiktoria Golik, Sophie Aubin, Robert Bossy
Building Large Lexicalized Ontologies from Text: a Use Case in Automatic Indexing of Biotechnology Patents. CoRR (2020)
Robert Bossy, Louise Deléger, Estelle Chaix, Mouhamadou Ba, Claire Nédellec
Bacteria Biotope at BioNLP Open Shared Tasks 2019. BioNLP-OST@EMNLP-IJNCLP (2019)
Claire Nédellec, Estelle Chaix, Robert Bossy, Louise Deléger, Sandra Dérozier, Jean-Baptiste Bohuon, Valentin Loux
L'ontologie OntoBiotope pour l'étude de la biodiversité microbienne. EGC (2018)
Fabienne Kettani, Stéphane Schneider, Sophie Aubin, Robert Bossy, Claire François, Clément Jonquet, Andon Tchechmedjiev, Anne Toulet, Claire Nédellec
Projet VisaTM : l'interconnexion OpenMinTeD - AgroPortal - ISTEX, un exemple de service de Text et Data Mining pour les scientifiques français. IC (2018)
Claire Nédellec, Robert Bossy, Estelle Chaix, Louise Deléger
Text-mining and ontologies: new approaches to knowledge discovery of microbial diversity. CoRR (2018)
Estelle Chaix, Bertrand Dubreucq, Abdelhak Fatihi, Dialekti Valsamou, Robert Bossy, Mouhamadou Ba, Louise Deléger, Pierre Zweigenbaum, Philippe Bessières, Loïc Lepiniec, Claire Nedellec
Overview of the Regulatory Network of Plant Seed Development (SeeDev) Task at the BioNLP Shared Task 2016. BioNLP (Shared Task) (2016)
Piotr Przybyla, Matthew Shardlow, Sophie Aubin, Robert Bossy, Richard Eckart de Castilho, Stelios Piperidis, John McNaught, Sophia Ananiadou
Text mining resources for the life sciences. Database J. Biol. Databases Curation 2016 (2016)
Louise Deléger, Robert Bossy, Estelle Chaix, Mouhamadou Ba, Arnaud Ferré, Philippe Bessières, Claire Nedellec
Overview of the Bacteria Biotope Task at BioNLP Shared Task 2016. BioNLP (Shared Task) (2016)
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Dialekti Valsamou, Philippe Bessières, Claire Nédellec
Overview of the gene regulation network and the bacteria biotope tasks in BioNLP'13 shared task. BMC Bioinform. 16 (S10) (2015)
Claire Nedellec, Robert Bossy, Dialekti Valsamou, Marion Ranoux, Wiktoria Golik, Pierre Sourdille
Information Extraction from Bibliography for Marker-Assisted Selection in Wheat. MTSR (2014)
Robert Bossy, Philippe Bessières, Claire Nédellec
BioNLP Shared Task 2013 - An overview of the Genic Regulation Network Task. BioNLP@ACL (Shared Task) (2013)
Claire Nédellec, Robert Bossy, Jin-Dong Kim, Jung-Jae Kim, Tomoko Ohta, Sampo Pyysalo, Pierre Zweigenbaum
Overview of BioNLP Shared Task 2013. BioNLP@ACL (Shared Task) (2013)
Wiktoria Golik, Robert Bossy, Zorana Ratkovic, Claire Nédellec
Improving term extraction with linguistic analysis in the biomedical domain. Res. Comput. Sci. 70 (2013)
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Philippe Bessières, Claire Nédellec
BioNLP shared Task 2013 - An Overview of the Bacteria Biotope Task. BioNLP@ACL (Shared Task) (2013)
Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Érick Alphonse, Maarten van de Guchte, Philippe Bessières, Claire Nedellec
BioNLP Shared Task - The Bacteria Track. BMC Bioinform. 13 (S-11) (2012)
Frédéric Papazian, Robert Bossy, Claire Nedellec
AlvisAE: a collaborative Web text annotation editor for knowledge acquisition. LAW@ACL (2012)
Julien Jourde, Alain-Pierre Manine, Philippe Veber, Karën Fort, Robert Bossy, Érick Alphonse, Philippe Bessières
BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming. BioNLP@ACL (Shared Task) (2011)
Jin-Dong Kim, Sampo Pyysalo, Tomoko Ohta, Robert Bossy, Ngan L. T. Nguyen, Jun'ichi Tsujii
Overview of BioNLP Shared Task 2011. BioNLP@ACL (Shared Task) (2011)
Robert Bossy, Julien Jourde, Philippe Bessières, Maarten van de Guchte, Claire Nédellec
BioNLP Shared Task 2011 - Bacteria Biotope. BioNLP@ACL (Shared Task) (2011)
Claire Nedellec, Wiktoria Golik, Sophie Aubin, Robert Bossy
Building Large Lexicalized Ontologies from Text: A Use Case in Automatic Indexing of Biotechnology Patents. EKAW (2010)
Robert Bossy, Alain Kotoujansky, Sophie Aubin, Claire Nedellec
Close Integration of ML and NLP Tools in BioAlvis for Semantic Search in Bacteriology. SWAT4LS (2008)
Robert Bossy
An Edition Control Policy Model for Scientific Collaborative Databases. WISE (1) (2001)