Philippe Bessières

Publication Activity (10 Years)

Years Active: 1997-2016
Publications (10 Years): 3

Top Topics

Coreference Resolution

Gene Regulation

Top Venues

BioNLP@ACL (Shared Task)

BioNLP (Shared Task)

Publications

Estelle Chaix, Bertrand Dubreucq, Abdelhak Fatihi, Dialekti Valsamou, Robert Bossy, Mouhamadou Ba, Louise Deléger, Pierre Zweigenbaum, Philippe Bessières, Loïc Lepiniec, Claire Nedellec
Overview of the Regulatory Network of Plant Seed Development (SeeDev) Task at the BioNLP Shared Task 2016. BioNLP (Shared Task) (2016)
Louise Deléger, Robert Bossy, Estelle Chaix, Mouhamadou Ba, Arnaud Ferré, Philippe Bessières, Claire Nedellec
Overview of the Bacteria Biotope Task at BioNLP Shared Task 2016. BioNLP (Shared Task) (2016)
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Dialekti Valsamou, Philippe Bessières, Claire Nédellec
Overview of the gene regulation network and the bacteria biotope tasks in BioNLP'13 shared task. BMC Bioinform. 16 (S10) (2015)
Robert Bossy, Philippe Bessières, Claire Nédellec
BioNLP Shared Task 2013 - An overview of the Genic Regulation Network Task. BioNLP@ACL (Shared Task) (2013)
Robert Bossy, Wiktoria Golik, Zorana Ratkovic, Philippe Bessières, Claire Nédellec
BioNLP shared Task 2013 - An Overview of the Bacteria Biotope Task. BioNLP@ACL (Shared Task) (2013)
Robert Bossy, Julien Jourde, Alain-Pierre Manine, Philippe Veber, Érick Alphonse, Maarten van de Guchte, Philippe Bessières, Claire Nedellec
BioNLP Shared Task - The Bacteria Track. BMC Bioinform. 13 (S-11) (2012)
Julien Jourde, Alain-Pierre Manine, Philippe Veber, Karën Fort, Robert Bossy, Érick Alphonse, Philippe Bessières
BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming. BioNLP@ACL (Shared Task) (2011)
Robert Bossy, Julien Jourde, Philippe Bessières, Maarten van de Guchte, Claire Nédellec
BioNLP Shared Task 2011 - Bacteria Biotope. BioNLP@ACL (Shared Task) (2011)
Alain-Pierre Manine, Érick Alphonse, Philippe Bessières
Extraction of Genic Interactions with the Recursive Logical Theory of an Ontology. CICLing (2010)
Pierre Nicolas, Aurélie Leduc, Stéphane Robin, Simon Rasmussen, Hanne Jarmer, Philippe Bessières
Transcriptional landscape estimation from tiling array data using a model of signal shift and drift. Bioinform. 25 (18) (2009)
Alain-Pierre Manine, Érick Alphonse, Philippe Bessières
Learning ontological rules to extract multiple relations of genic interactions from text. Int. J. Medical Informatics 78 (12) (2009)
Anne Goelzer, Fadia Bekkal-Brikci, Isabelle Martin-Verstraete, Philippe Noirot, Philippe Bessières, Stéphane Aymerich, Vincent Fromion
Reconstruction and analysis of the genetic and metabolic regulatory networks of the central metabolism of Bacillus subtilis. BMC Syst. Biol. 2 (2008)
Alain-Pierre Manine, Érick Alphonse, Philippe Bessières
Information Extraction as an Ontology Population Task and Its Application to Genic Interactions. ICTAI (2) (2008)
Érick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, Sandrine Lagarrigue, Adeline Nazarenko, Alain-Pierre Manine, Claire Nedellec, Mohamed Ould Abdel Vetah, Thierry Poibeau, Davy Weissenbacher
Event-based Information Extraction for the biomedical domain: the Caderige project CoRR (2006)
Érick Alphonse, Sophie Aubin, Philippe Bessières, Gilles Bisson, Thierry Hamon, Sandrine Lagarrigue, Adeline Nazarenko, Alain-Pierre Manine, Claire Nédellec, Mohamed Ould Abdel Vetah, Thierry Poibeau, Davy Weissenbacher
Event-Based Information Extraction for the Biomedical Domain: the Caderige Project. NLPBA/BioNLP (2004)
Alain Lelu, Philippe Bessières, Alain Zasadzinski, Dominique Besagni
Extraction de processus fonctionnels en génétique des microbes à partir de résumés MEDLINE. EGC (2004)
Mark Hoebeke, Pierre Nicolas, Philippe Bessières
MuGeN: Simultaneous Exploration of Multiple Genomes and Computer Analysis Results. Bioinform. 19 (7) (2003)
Mark Hoebeke, Hélène Chiapello, Philippe Noirot, Philippe Bessières
SPiD: a subtilis protein interaction database. Bioinform. 17 (12) (2001)
Claire Nedellec, Mohamed Ould Abdel Vetah, Philippe Bessières
Sentence Filtering for Information Extraction in Genomics, a Classification Problem. PKDD (2001)
Guy Perrière, Philippe Bessières, Bernard Labedan
EMGLib: the Enhanced Microbial Genomes Library (update 2000). Nucleic Acids Res. 28 (1) (2000)
Guy Perrière, Philippe Bessières, Bernard Labedan
The Enhanced Microbial Genomes Library. Nucleic Acids Res. 27 (1) (1999)
Laurent Bize, Florence Muri, Franck Samson, François Rodolphe, S. Dusko Ehrlich, Bernard Prun, Philippe Bessières
using hidden Markov models. RECOMB (1999)
V. Biaudet, Franck Samson, Philippe Bessières
Micado - a network-oriented database for microbial genomes. Comput. Appl. Biosci. 13 (4) (1997)