Qiang Yu

Publication Activity (10 Years)

Years Active: 2012-2023
Publications (10 Years): 7

Top Topics

Selection Algorithm

Motif Discovery

Likelihood Maximization

Finite Mixture Model

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

J. Bioinform. Comput. Biol.

Publications

Jingfen Lan, Wenxiang Chen, Ganggang Yin, Haque A. K. Alvi, Kun Xie, Qiang Yu, Xiguo Yuan
LDSSNV: A Linkage Disequilibrium-Based Method for the Detection of Somatic Single-Nucleotide Variants. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (5) (2023)
Qiang Yu, Xiao Zhang, Yana Hu, Shengpin Chen, Liying Yang
A Method for Predicting DNA Motif Length Based On Deep Learning. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (1) (2023)
Qiang Yu, Xiang Zhao, Hongwei Huo
A new algorithm for DNA motif discovery using multiple sample sequence sets. J. Bioinform. Comput. Biol. 17 (4) (2019)
Qiang Yu, Xiao Zhang
A New Efficient Algorithm for Quorum Planted Motif Search on Large DNA Datasets. IEEE Access 7 (2019)
Qiang Yu, Dingbang Wei, Hongwei Huo
SamSelect: a sample sequence selection algorithm for quorum planted motif search on large DNA datasets. BMC Bioinform. 19 (1) (2018)
Hongwei Huo, Zhigang Sun, Shuangjiang Li, Jeffrey Scott Vitter, Xinkun Wang, Qiang Yu, Jun Huan
CS2A: A Compressed Suffix Array-Based Method for Short Read Alignment. DCC (2016)
Qiang Yu, Hongwei Huo, Ruixing Zhao, Dazheng Feng, Jeffrey Scott Vitter, Jun Huan
) motif search. BMC Bioinform. 17 (S-9) (2016)
Qiang Yu, Hongwei Huo, Ruixing Zhao, Dazheng Feng, Jeffrey Scott Vitter, Jun Huan
Reference sequence selection for motif searches. BIBM (2015)
Hongwei Huo, Longgang Chen, Heng Zhao, Jeffrey Scott Vitter, Yakov Nekrich, Qiang Yu
A Data-Aware FM-index. ALENEX (2015)
Qiang Yu, Hongwei Huo, Jeffrey Scott Vitter, Jun Huan, Yakov Nekrich
An Efficient Exact Algorithm for the Motif Stem Search Problem over Large Alphabets. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (2) (2015)
Qiang Yu, Hongwei Huo, Xiaoyang Chen, Haitao Guo, Jeffrey Scott Vitter, Jun Huan
An efficient motif finding algorithm for large DNA data sets. BIBM (2014)
Yipu Zhang, Hongwei Huo, Qiang Yu
A Heuristic Cluster-Based EM Algorithm for the Planted (L, d) Problem. J. Bioinform. Comput. Biol. 11 (4) (2013)
Qiang Yu, Hongwei Huo, Jeffrey Scott Vitter, Jun Huan, Yakov Nekrich
StemFinder: An efficient algorithm for searching motif stems over large alphabets. BIBM (2013)
Hongwei Huo, Shuai Lin, Qiang Yu, Yipu Zhang, Vojislav Stojkovic
A MapReduce-based Algorithm for Motif Search. IPDPS Workshops (2012)