An efficient motif finding algorithm for large DNA data sets.

Qiang Yu Hongwei Huo Xiaoyang Chen Haitao Guo Jeffrey Scott Vitter Jun Huan

Published in: BIBM (2014)

Keyphrases

data sets
motif finding
motif discovery
optimization algorithm
dynamic programming
preprocessing
simulated annealing
input data
optimal solution
benchmark problems
objective function
neural network
search space
evolutionary algorithm
np hard
natural language processing
min max