Minzhu Xie

Publication Activity (10 Years)

Years Active: 2007-2023
Publications (10 Years): 14

Top Topics

Protein Interaction Data

Matrix Factorization

Norm Regularization

Association Analysis

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Int. J. Data Min. Bioinform.

Publications

Yabin Kuang, Minzhu Xie
Subtype-DCGCN: an unsupervised approach for cancer subtype diagnosis based on multi-omics data. BIBM (2023)
Junjun Zhang, Minzhu Xie
norm regularization terms for drug-target interactions prediction. BMC Bioinform. 24 (1) (2023)
Minzhu Xie, Xiaowen Lei, Jiancheng Zhong, Jianxing Ouyang, Guijing Li
Drug response prediction using graph representation learning and Laplacian feature selection. BMC Bioinform. (8) (2022)
Junjun Zhang, Minzhu Xie
NNDSVD-GRMF: A Graph Dual Regularization Matrix Factorization Method Using Non-Negative Initialization for Predicting Drug-Target Interactions. IEEE Access 10 (2022)
Junjun Zhang, Minzhu Xie
Graph regularized non-negative matrix factorization with prior knowledge consistency constraint for drug-target interactions prediction. BMC Bioinform. 23 (1) (2022)
Minzhu Xie, Fang Liu
Overview of Machine Learning Methods for Genome-Wide Association Analysis. BIBE (2021)
Dipan Shaw, Hao Chen, Minzhu Xie, Tao Jiang
DeepLPI: a multimodal deep learning method for predicting the interactions between lncRNAs and protein isoforms. BMC Bioinform. 22 (1) (2021)
Jiancheng Zhong, Chao Tang, Wei Peng, Minzhu Xie, Yusui Sun, Qiang Tang, Qiu Xiao, Jiahong Yang
A novel essential protein identification method based on PPI networks and gene expression data. BMC Bioinform. 22 (1) (2021)
Jiancheng Zhong, Yusui Sun, Minzhu Xie, Wei Peng, Chushu Zhang, Fang-Xiang Wu, Jianxin Wang
Proteoform characterization based on top-down mass spectrometry. Briefings Bioinform. 22 (2) (2021)
Chencheng Xu, Qiao Liu, Jianyu Zhou, Minzhu Xie, Jianxing Feng, Tao Jiang
Quantifying functional impact of non-coding variants with multi-task Bayesian neural network. Bioinform. 36 (5) (2020)
Jianxing Ouyang, Minzhu Xie, Xinqiu Liu
DIMDRP: A Double Iteration Method for Drug Response Prediction. IEEE Access 7 (2019)
Xiwei Tang, Wei Peng, Minzhu Xie
Iteration method for detecting disease genes in terms of the integration of the cellular compartment information with the protein-protein interaction data. Int. J. Data Min. Bioinform. 18 (4) (2017)
Xiwei Tang, Xuejun Yang, Yongfan Li, Wei Hu, Ming-Cai Zheng, Wei Peng, Minzhu Xie
Identification of essential proteins via the network topology feature and subcellular localisation. Int. J. Data Min. Bioinform. 16 (4) (2016)
Minzhu Xie, Qiong Wu, Jianxin Wang, Tao Jiang
H-PoP and H-PoPG: heuristic partitioning algorithms for single individual haplotyping of polyploids. Bioinform. 32 (24) (2016)
Minzhu Xie, Jianxin Wang, Xin Chen
LGH: A Fast and Accurate Algorithm for Single Individual Haplotyping Based on a Two-Locus Linkage Graph. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (6) (2015)
Xiaojun Ding, Jianxin Wang, Alex Zelikovsky, Xuan Guo, Minzhu Xie, Yi Pan
Searching High-Order SNP Combinations for Complex Diseases Based on Energy Distribution Difference. IEEE ACM Trans. Comput. Biol. Bioinform. 12 (3) (2015)
Minzhu Xie, Jing Wang
Parameterised algorithms of the individual haplotyping problem with gaps. Int. J. Bioinform. Res. Appl. 9 (1) (2013)
Yang Yang, Minzhu Xie
A parameterized enumeration algorithm for the haplotype assembly problem. BMEI (2013)
Minzhu Xie, Jing Li, Tao Jiang
Detecting genome-wide epistases based on the clustering of relatively frequent items. Bioinform. 28 (1) (2012)
Minzhu Xie, Jianxin Wang, Tao Jiang
A fast and accurate algorithm for single individual haplotyping. BMC Syst. Biol. 6 (S-2) (2012)
Minzhu Xie, Jing Li, Tao Jiang
Accurate HLA type inference using a weighted similarity graph. BMC Bioinform. 11 (S-11) (2010)
Jianxin Wang, Minzhu Xie, Jianer Chen
A Practical Exact Algorithm for the Individual Haplotyping Problem MEC/GI. Algorithmica 56 (3) (2010)
Minzhu Xie, Jianxin Wang, Jianer Chen
A practical parameterised algorithm for the individual haplotyping problem MLF. Math. Struct. Comput. Sci. 20 (5) (2010)
Minzhu Xie, Jianxin Wang, Jianer Chen
A Practical Parameterized Algorithm for the Individual Haplotyping Problem MLF. TAMC (2008)
Minzhu Xie, Jianxin Wang, Wei Zhou, Jianer Chen
A Practical Parameterized Algorithm for Weighted Minimum Letter Flips Model of the Individual Haplotyping Problem. FAW (2008)
Minzhu Xie, Jianxin Wang, Jianer Chen
A Practical Exact Algorithm for the Individual Haplotyping Problem MEC. BMEI (1) (2008)
Minzhu Xie, Jianxin Wang, Jianer Chen
A Practical Exact Algorithm for the Individual Haplotyping Problem MEC/GI. COCOON (2008)
Minzhu Xie, Jianxin Wang
An Improved (and Practical) Parameterized Algorithm for the Individual Haplotyping Problem MFR with Mate-Pairs. Algorithmica 52 (2) (2008)
Minzhu Xie, Jianxin Wang, Jianer Chen
A model of higher accuracy for the individual haplotyping problem based on weighted SNP fragments and genotype with errors. ISMB (2008)
Minzhu Xie, Jianer Chen, Jianxin Wang
Research on Parameterized Algorithms of the Individual Haplotyping Problem. J. Bioinform. Comput. Biol. 5 (3) (2007)