Jing Li

Publication Activity (10 Years)

Years Active: 2002-2023
Publications (10 Years): 15

Top Topics

Subcellular Localization

Integrating Multiple

Tensor Factorization

Experimental Designs

Top Venues

Publications

Yige Sun, Jing Li, Yifan Xu, Tingting Zhang, Xiaofeng Wang
Deep learning versus conventional methods for missing data imputation: A review and comparative study. Expert Syst. Appl. 227 (2023)
Huiyuan Chen, Jing Li
Learning Data-Driven Drug-Target-Disease Interaction via Neural Tensor Network. IJCAI (2020)
Huiyuan Chen, Jing Li
Neural Tensor Model for Learning Multi-Aspect Factors in Recommender Systems. IJCAI (2020)
Huiyuan Chen, Jing Li
Data Poisoning Attacks on Cross-domain Recommendation. CIKM (2019)
Huiyuan Chen, Jing Li
Finding Stable Clustering for Noisy Data via Structure-Aware Representation. IEEE BigData (2019)
Huiyuan Chen, Jing Li
Modeling Relational Drug-Target-Disease Interactions via Tensor Factorization with Multiple Web Sources. WWW (2019)
Huiyuan Chen, Jing Li
Collective Tensor Completion with Multiple Heterogeneous Side Information. IEEE BigData (2019)
Huiyuan Chen, Sudha K. Iyengar, Jing Li
Large-scale Analysis of Drug Combinations by Integrating Multiple Heterogeneous Information Networks. BCB (2019)
Huiyuan Chen, Jing Li
Collaborative Ranking Tags and Items via Cross-domain Recommendation. IEEE BigData (2019)
Huiyuan Chen, Jing Li
Adversarial tensor factorization for context-aware recommendation. RecSys (2019)
Shanping Qiao, Baoqiang Yan, Jing Li
Ensemble learning for protein multiplex subcellular localization prediction based on weighted KNN with different features. Appl. Intell. 48 (7) (2018)
Huiyuan Chen, Jing Li
Exploiting Structural and Temporal Evolution in Dynamic Link Prediction. CIKM (2018)
Huiyuan Chen, Jing Li
DrugCom: Synergistic Discovery of Drug Combinations Using Tensor Decomposition. ICDM (2018)
Huiyuan Chen, Jing Li
A Flexible and Robust Multi-Source Learning Algorithm for Drug Repositioning. BCB (2017)
Huiyuan Chen, Jing Li
Learning Multiple Similarities of Users and Items in Recommender Systems. ICDM (2017)
Ke Hu, Angela Ting, Jing Li
BSPAT: a fast online tool for DNA methylation co-occurrence pattern analysis based on high-throughput bisulfite sequencing data. BMC Bioinform. 16 (2015)
Yubao Wu, Ruoming Jin, Jing Li, Xiang Zhang
Robust Local Community Detection: On Free Rider Effect and Its Elimination. Proc. VLDB Endow. 8 (7) (2015)
Wenhui Wang, Sen Yang, Xiang Zhang, Jing Li
Drug repositioning by integrating target information through a heterogeneous network model. Bioinform. 30 (20) (2014)
Matthew Hayes, Jing Li
Bellerophon: a hybrid method for detecting interchromo-somal rearrangements at base pair resolution using next-generation sequencing data. BMC Bioinform. 14 (S-5) (2013)
Wenhui Wang, Xiaolin Yin, Yoon Soo Pyon, Matthew Hayes, Jing Li
Rare variant discovery and calling by sequencing pooled samples with overlaps. Bioinform. 29 (1) (2013)
Min Wu, Chee Keong Kwoh, Teresa M. Przytycka, Jing Li, Jie Zheng
Integration of genomic and epigenomic features to predict meiotic recombination hotspots in human and mouse. BCB (2012)
Amin Assareh, L. Gwenn Volkert, Jing Li
Feature selections using AdaBoost: Application in gene-gene interaction detection. BIBM Workshops (2012)
Wei Cheng, Xiang Zhang, Yubao Wu, Xiaolin Yin, Jing Li, David Heckerman, Wei Wang
Inferring novel associations between SNP sets and gene sets in eQTL study using sparse graphical model. BCB (2012)
Amin Assareh, L. Gwenn Volkert, Jing Li
Interaction Trees: Optimizing Ensembles of Decision Trees for Gene-Gene Interaction Detections. ICMLA (1) (2012)
Minzhu Xie, Jing Li, Tao Jiang
Detecting genome-wide epistases based on the clustering of relatively frequent items. Bioinform. 28 (1) (2012)
Yixuan Chen, Jing Li
Generation of Synthetic Data and Experimental Designs in Evaluating Interactions for Association Studies. J. Bioinform. Comput. Biol. 10 (1) (2012)
Xin Li, Jing Li
Haplotype Reconstruction in Large Pedigrees with Many Untyped Individuals. RECOMB (2011)
Xin Li, Jing Li
Haplotype Reconstruction in Large Pedigrees with Untyped Individuals through IBD Inference. J. Comput. Biol. 18 (11) (2011)
Yoon Soo Pyon, Matthew Hayes, Jing Li
Model based clustering approach for identifying structural variation using next generation sequencing data. ICCABS (2011)
Yoon Soo Pyon, Xin Li, Jing Li
Cancer progression analysis based on ordinal relationship of cancer stages and co-expression network modularity. Int. J. Data Min. Bioinform. 5 (3) (2011)
Yixuan Chen, Jing Li
Generation of synthetic data in evaluating interactions for association studies. BCB (2011)
Min Wu, Chee Keong Kwoh, Teresa M. Przytycka, Jing Li, Jie Zheng
Prediction of Trans-regulators of Recombination Hotspots in Mouse Genome. BIBM (2011)
Jing Li, Benjamin Horstman, Yixuan Chen
Detecting epistatic effects in association studies at a genomic level based on an ensemble approach. Bioinform. 27 (13) (2011)
Minzhu Xie, Jing Li, Tao Jiang
Accurate HLA type inference using a weighted similarity graph. BMC Bioinform. 11 (S-11) (2010)
Cen Gao, Jing Li
Machine learning approaches for the investigation of features beyond seed matches affecting miRNA binding. BIBM (2010)
Yixuan Chen, Xin Li, Jing Li
A novel approach for haplotype-based association analysis using family data. BMC Bioinform. 11 (S-1) (2010)
Xin Li, Xiaolin Yin, Jing Li
Efficient identification of identical-by-descent status in pedigrees with many untyped individuals. Bioinform. 26 (12) (2010)
Xiaolin Yin, Jing Li
Detecting Copy Number Variations from Array CGH Data Based on a Conditional Random Field Model. J. Bioinform. Comput. Biol. 8 (2) (2010)
Xin Li, Yixuan Chen, Jing Li
Detecting Genome-wide Haplotype Polymorphism by Combined Use of Mendelian Constraints and Local Population Structure. Pacific Symposium on Biocomputing (2010)
Kanchana Narayanan, Jing Li
MAVEN: a tool for visualization and functional analysis of genome-wide association results. Bioinform. 26 (2) (2010)
Sinan Erten, Xin Li, Gürkan Bebek, Jing Li, Mehmet Koyutürk
Phylogenetic analysis of modularity in protein interaction networks. BMC Bioinform. 10 (2009)
Yoon Soo Pyon, Jing Li
Identifying Gene Signatures from Cancer Progression Data Using Ordinal Analysis. BIBM (2009)
Xin Li, Jing Li
An Almost Linear Time Algorithm for a General Haplotype Solution on Tree Pedigrees with no Recombination and its Extensions. J. Bioinform. Comput. Biol. 7 (3) (2009)
Matthew Hayes, Jing Li
A Linear-Time Algorithm for Analyzing Array CGH Data Using Log Ratio Triangulation. ISBRA (2009)
Jing Li
A novel strategy for detecting multiple loci in Genome-Wide Association Studies of complex diseases. Int. J. Bioinform. Res. Appl. 4 (2) (2008)
Jing Li, Yixuan Chen
Generating samples for association studies based on HapMap data. BMC Bioinform. 9 (2008)
Jing Li, Tao Jiang
A Survey on Haplotyping Algorithms for Tightly Linked Markers. J. Bioinform. Comput. Biol. 6 (1) (2008)
Jing Li
Prioritize and Select SNPs for Association Studies with Multi-Stage Designs. J. Comput. Biol. 15 (3) (2008)
Zheng Liu, S. Frank Yan, John R. Walker, Theresa A. Zwingman, Tao Jiang, Jing Li, Yingyao Zhou
Study of gene function based on spatial co-expression in a high-resolution mouse brain atlas. BMC Syst. Biol. 1 (2007)
Jing Li, Yingyao Zhou, Robert C. Elston
Haplotype-based quantitative trait mapping using a clustering algorithm. BMC Bioinform. 7 (2006)
Jing Li, Tao Jiang
Computing the Minimum Recombinant Haplotype Configuration from Incomplete Genotype Data on a Pedigree by Integer Linear Programming. J. Comput. Biol. 12 (6) (2005)
Jing Li, Tao Jiang
Haplotype-based linkage disequilibrium mapping via direct data mining. Bioinform. 21 (24) (2005)
S. Frank Yan, Hayk Asatryan, Jing Li, Yingyao Zhou
Novel Statistical Approach for Primary High-Throughput Screening Hit Selection. J. Chem. Inf. Model. 45 (6) (2005)
Jing Li, Tao Jiang
An exact solution for finding minimum recombinant haplotype configurations on pedigrees with missing data by integer linear programming. RECOMB (2004)
Jing Li, Tao Jiang
Efficient Inference of Haplotypes from Genotypes on a Pedigree. J. Bioinform. Comput. Biol. 1 (1) (2003)
Jing Li, Tao Jiang
Efficient rule-based haplotyping algorithms for pedigree data. RECOMB (2003)
Koichiro Doi, Jing Li, Tao Jiang
Minimum Recombiant Haplotype Configuration on Tree Pedigrees. WABI (2003)
Paola Bonizzoni, Gianluca Della Vedova, Riccardo Dondi, Jing Li
The Haplotyping Problem: An Overview of Computational Models and Solutions. J. Comput. Sci. Technol. 18 (6) (2003)
Jing Li, Chris Benner, Tao Jiang, Yingyao Zhou
Statistical Validation of Compound Structure-Selectivity Relationship Using NCI Cancer Database. METMBS (2003)
Gianluca Della Vedova, Tao Jiang, Jing Li, Jianjun Wen
Approximating minimum quartet inconsistency (abstract). SODA (2002)