Mercè Llabrés

Publication Activity (10 Years)

Years Active: 1997-2023
Publications (10 Years): 8

Top Topics

Metabolic Networks

Maximum Parsimony

Escherichia Coli

Top Venues

Fundam. Informaticae

J. Comput. Biol.

Publications

Irene García, Bessem Chouaia, Mercè Llabrés, Pere Palmer-Rodríguez, Marta Simeoni
Analysing the Expressiveness of Metabolic Networks Representations. WIVACE (2023)
Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
The Generalized Robinson-Foulds Distance for Phylogenetic Trees. J. Comput. Biol. 28 (12) (2021)
Joan Carles Pons, A. David Páez-Espino, Gabriel Riera, Natalia Ivanova, Nikos Kyrpides, Mercè Llabrés
VPF-Class: taxonomic assignment and host prediction of uncultivated viruses based on viral protein families. Bioinform. 37 (13) (2021)
Mercè Llabrés, Gabriel Riera, Francesc Rosselló, Gabriel Valiente
Alignment of biological networks by integer linear programming: virus-host protein-protein interaction networks. BMC Bioinform. (6) (2020)
Mariana Reyes-Prieto, Carlos Vargas-Chávez, Mercè Llabrés, Pere Palmer, Amparo Latorre, Andrés Moya
An update on the Symbiotic Genomes Database (SymGenDB): a collection of metadata, genomic, genetic and protein sequences, orthologs and metabolic networks of symbiotic organisms. Database J. Biol. Databases Curation 2020 (2020)
Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
A Generalized Robinson-Foulds Distance for Clonal Trees, Mutation Trees, and Phylogenetic Trees and Networks. BCB (2020)
Adrià Alcalà, Ricardo Alberich, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
AligNet: alignment of protein-protein interaction networks. BMC Bioinform. (6) (2020)
A. David Páez-Espino, Simon Roux, I-Min A. Chen, Krishna Palaniappan, Anna Ratner, Ken Chu, Marcel Huntemann, T. B. K. Reddy, Joan Carles Pons, Mercè Llabrés, Emiley A. Eloe-Fadrosh, Natalia N. Ivanova, Nikos Kyrpides
IMG/VR v.2.0: an integrated data management and analysis system for cultivated and environmental viral genomes. Nucleic Acids Res. 47 (Database-Issue) (2019)
Ricardo Alberich, Mercè Llabrés, David Sánchez, Marta Simeoni, Marc Tuduri
MP-Align: alignment of metabolic pathways. BMC Syst. Biol. 8 (2014)
Adrià Alcalà, Mercè Llabrés, Francesc Rosselló, Pau Rullan
Tree-Child Cluster Networks. Fundam. Informaticae 134 (1-2) (2014)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
Comparison of Galled Trees. IEEE ACM Trans. Comput. Biol. Bioinform. 8 (2) (2011)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló
Two Results on Distances for Phylogenetic Networks. IWPACBB (2010)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
Path lengths in tree-child time consistent hybridization networks. Inf. Sci. 180 (3) (2010)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
On Nakhleh's Metric for Reduced Phylogenetic Networks. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (4) (2009)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
Comparison of Galled Trees CoRR (2009)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
Metrics for Phylogenetic Networks II: Nodal and Triplets Metrics. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (3) (2009)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
Metrics for Phylogenetic Networks I: Generalizations of the Robinson-Foulds Metric. IEEE ACM Trans. Comput. Biol. Bioinform. 6 (1) (2009)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
The comparison of tree-sibling time consistent phylogenetic networks is graph isomorphism-complete CoRR (2009)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
Nodal distances for rooted phylogenetic trees. CoRR (2008)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
Path lengths in tree-child time consistent hybridization networks CoRR (2008)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
A distance metric for a class of tree-sibling phylogenetic networks. Bioinform. 24 (13) (2008)
Gabriel Cardona, Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
A Distance Metric for Tree-Sibling Time Consistent Phylogenetic Networks CoRR (2008)
Mercè Llabrés, Jairo Rocha, Francesc Rosselló, Gabriel Valiente
On the Ancestral Compatibility of Two Phylogenetic Trees with Nested Taxa CoRR (2005)
Mercè Llabrés, Francesc Rosselló
The uniqueness condition for the double pushout transformation of algebras. Inf. Sci. 171 (1-3) (2005)
Jairo Rocha, Mercè Llabrés, Ricardo Alberich
A family of metrics for biopolymers based on counting independent sets. Comput. Biol. Chem. 29 (5) (2005)
Giulio Marcon, Nicola Cannata, Mercè Llabrés, Marta Simeoni, Giorgio Valle
Ordering BAC Clones from Fingerprint Data obtained through Four Enzymes Digestion and Fluorescent Labeling. Spanish Bioinformatics Conference (2004)
Ricardo Alberich, Mercè Llabrés, Francesc Rosselló
Single-Pushout Transformation Of Total Algebras. Int. J. Found. Comput. Sci. 15 (1) (2004)
Mercè Llabrés, Francesc Rosselló
A new family of metrics for biopolymer contact structures. Comput. Biol. Chem. 28 (1) (2004)
Mercè Llabrés, Francesc Rosselló, Gabriel Valiente
On Supertrees of Phylogenetic Trees. Spanish Bioinformatics Conference (2004)
Mercè Llabrés, Francesc Rosselló
Modelling Biochemical Operations on RNA Secondary Structures CoRR (2003)
Mercè Llabrés, Francesc Rosselló
A family of metrics on contact structures based on edge ideals CoRR (2003)
Peter Burmeister, Mercè Llabrés, Francesc Rosselló
Pushout Complements for Partly Total Algebras. Math. Struct. Comput. Sci. 12 (2) (2002)
Reiko Heckel, Mercè Llabrés, Hartmut Ehrig, Fernando Orejas
Concurrency and Loose Semantics of Open Graph Transformation Systems. Math. Struct. Comput. Sci. 12 (4) (2002)
Mercè Llabrés, Francesc Rosselló
Towards a Double Pushout Transformation of Algebras. Electron. Notes Theor. Comput. Sci. 51 (2001)
Fabio Gadducci, Reiko Heckel, Mercè Llabrés
A Bi-Categorical Axiomatisation of Concurrent Graph Rewriting. CTCS (1999)
Hartmut Ehrig, Reiko Heckel, Mercè Llabrés, Fernando Orejas, Julia Padberg, Grzegorz Rozenberg
Double-Pullback Graph Transitions: A Rule-Based Framework with Incomplete Information. TAGT (1998)
Mercè Llabrés, Francesc Rosselló
Pushout Complements for Arbitrary Partial Algebras. TAGT (1998)
Mercè Llabrés, Francesc Rosselló
Double-Pushout Hypergraph Rewriting Using Total Conformisms. Fundam. Informaticae 30 (2) (1997)