Marta Simeoni

Publication Activity (10 Years)

Years Active: 1998-2024
Publications (10 Years): 10

Top Topics

Metabolic Pathways

Protein Complexes

Top Venues

EDBT/ICDT Workshops

Fundam. Informaticae

Publications

Giulia Rovinelli, Davide Rocchesso, Marta Simeoni, Alessandra Raffaetà
Using Semantic Trajectories for Spatio-temporal Characterisation of Underwater Noise. EDBT/ICDT Workshops (2024)
Alvise Spanò, Lorenzo Fanton, Davide Pizzolato, Jacopo Moi, Francesco Vinci, Alberto Pesce, Cedrix Jurgal Dongmo Foumthuim, Achille Giacometti, Marta Simeoni
Rinmaker: a fast, versatile and reliable tool to determine residue interaction networks in proteins. BMC Bioinform. 24 (1) (2023)
Sara Corazza, Fabio Pittarello, Marta Simeoni
3D Molecules Visualization with XRmol: An AR Web Tool for Mobile Devices. EuroXR (2023)
Irene García, Bessem Chouaia, Mercè Llabrés, Pere Palmer-Rodríguez, Marta Simeoni
Analysing the Expressiveness of Metabolic Networks Representations. WIVACE (2023)
Andrea Bianchi, Antinisca Di Marco, Francesca Marzi, Giovanni Stilo, Cristina Pellegrini, Stefano Masi, Alessandro Mengozzi, Agostino Virdis, Marco Salvatore Nobile, Marta Simeoni
Trustworthy Machine Learning Predictions to Support Clinical Research and Decisions. CBMS (2023)
Alvise Spanò, Lorenzo Fanton, Davide Pizzolato, Jacopo Moi, Francesco Vinci, Alberto Pesce, Cedrix Jurgal Dongmo Foumthuim, Achille Giacometti, Marta Simeoni
Rinmaker: a fast, versatile and reliable tool to determine residue interaction networks in proteins. BMC Bioinform. 24 (1) (2023)
Bruno Brandoli, Alessandra Raffaetà, Marta Simeoni, Pedram Adibi, Fateha Khanam Bappee, Fabio Pranovi, Giulia Rovinelli, Elisabetta Russo, Claudio Silvestri, Amílcar Soares, Stan Matwin
From multiple aspect trajectories to predictive analysis: a case study on fishing vessels in the Northern Adriatic sea. GeoInformatica 26 (4) (2022)
Giulia Rovinelli, Stan Matwin, Fabio Pranovi, Elisabetta Russo, Claudio Silvestri, Marta Simeoni, Alessandra Raffaetà
Multiple aspect trajectories: a case study on fishing vessels in the Northern Adriatic sea. EDBT/ICDT Workshops (2021)
Pedram Adibi, Fabio Pranovi, Alessandra Raffaetà, Elisabetta Russo, Claudio Silvestri, Marta Simeoni, Amílcar Soares Júnior, Stan Matwin
Predicting Fishing Effort and Catch Using Semantic Trajectories and Machine Learning. MASTER@PKDD/ECML (2019)
Paolo Baldan, Martina Bocci, Daniele Brigolin, Nicoletta Cocco, Monika Heiner, Marta Simeoni
Petri Nets for Modelling and Analysing Trophic Networks. Fundam. Informaticae 160 (1-2) (2018)
Paolo Baldan, Martina Bocci, Daniele Brigolin, Nicoletta Cocco, Marta Simeoni
Petri nets for modelling and analysing trophic networks. BioPPN@Petri Nets (2015)
Ricardo Alberich, Mercè Llabrés, David Sánchez, Marta Simeoni, Marc Tuduri
MP-Align: alignment of metabolic pathways. BMC Syst. Biol. 8 (2014)
Paolo Baldan, Nicoletta Cocco, Federica Giummolè, Marta Simeoni
Comparing Metabolic Pathways through Reactions and Potential Fluxes. Trans. Petri Nets Other Model. Concurr. 8 (2013)
Paolo Baldan, Martina Bocci, Nicoletta Cocco, Marta Simeoni
Comparing metabolic pathways through potential fluxes: a selective opening approach. BioPPN@Petri Nets (2013)
Paolo Baldan, Nicoletta Cocco, Marta Simeoni
Representing and Comparing Metabolic Pathways as Petri Nets with MPath2PN and CoMeta. Electron. Notes Theor. Comput. Sci. 299 (2013)
Paolo Baldan, Nicoletta Cocco, Andrea Marin, Marta Simeoni
Petri nets for modelling metabolic pathways: a survey. Nat. Comput. 9 (4) (2010)
Simonetta Balsamo, Marta Simeoni
On Relationships Between Stochastic Process Algebras with Æmilia and Queueing Network Models. FIRB-Perf (2005)
Giulio Marcon, Nicola Cannata, Mercè Llabrés, Marta Simeoni, Giorgio Valle
Ordering BAC Clones from Fingerprint Data obtained through Four Enzymes Digestion and Fluorescent Labeling. Spanish Bioinformatics Conference (2004)
Marco Antoniotti, Carla Piazza, Alberto Policriti, Marta Simeoni, Bud Mishra
Taming the complexity of biochemical models through bisimulation and collapsing: theory and practice. Theor. Comput. Sci. 325 (1) (2004)
Simonetta Balsamo, Antinisca Di Marco, Paola Inverardi, Marta Simeoni
Model-Based Performance Prediction in Software Development: A Survey. IEEE Trans. Software Eng. 30 (5) (2004)
Simonetta Balsamo, Marco Bernardo, Marta Simeoni
Performance Evaluation at the Software Architecture Level. SFM (2003)
Marco Antoniotti, Bhubaneswar Mishra, Carla Piazza, Alberto Policriti, Marta Simeoni
Modeling Cellular Behavior with Hybrid Automata: Bisimulation and Collapsing. CMSB (2003)
Simonetta Balsamo, Marco Bernardo, Marta Simeoni
Combining stochastic process algebras and queueing networks for software architecture analysis. Workshop on Software and Performance (2002)
Simonetta Balsamo, Marta Simeoni
Integrating Performance Modeling in the Software Development Process. RISSEF (2002)
Martin Große-Rhode, Francesco Parisi-Presicce, Marta Simeoni
Formal Software Specification with Refinements and Modules of Typed Graph Transformation Systems. J. Comput. Syst. Sci. 64 (2) (2002)
Marta Simeoni
An Abstract Module Concept for Graph Transformation Systems. Electron. Notes Theor. Comput. Sci. 51 (2001)
Andrea Formisano, Eugenio G. Omodeo, Marta Simeoni
A graphical approach to relational reasoning. Electron. Notes Theor. Comput. Sci. 44 (3) (2001)
Andrea Formisano, Marta Simeoni
An AGG Application Supporting Visual Reasoning. Electron. Notes Theor. Comput. Sci. 50 (3) (2001)
Roswitha Bardohl, Martin Große-Rhode, Marta Simeoni
Interactive Rule-Based Specification with an Application to Visual Language Definition. WADT (2001)
Paolo Bottoni, Francesco Parisi-Presicce, Marta Simeoni
On a Uniform Representation of Transformation Systems. AGTIVE (1999)
Martin Große-Rhode, Francesco Parisi-Presicce, Marta Simeoni, Gabriele Taentzer
Modeling Distributed Systems by Modular Graph Transformation Based on Refinement via Rule Expressions. AGTIVE (1999)
Marta Simeoni, Maria Staniszkis
Cooperating Graph Grammar Systems. Grammatical Models of Multi-Agent Systems (1999)
Martin Große-Rhode, Francesco Parisi-Presicce, Marta Simeoni
Spatial and Temporal Refinement of Typed Graph Transformation Systems. MFCS (1998)
Martin Große-Rhode, Francesco Parisi-Presicce, Marta Simeoni
Refinements of Graph Transformation Systems via Rule Expressions. TAGT (1998)
Paolo Bottoni, Francesco Parisi-Presicce, Marta Simeoni
From Formulae to Rewriting Systems. TAGT (1998)
Martin Große-Rhode, Francesco Parisi-Presicce, Marta Simeoni
Refinements and Modules for Typed Graph Transformation Systems. WADT (1998)