Melanie I. Stefan

Publication Activity (10 Years)

Years Active: 2007-2022
Publications (10 Years): 8

Top Topics

Computational Models

Internal And External

Top Venues

PLoS Comput. Biol.

Frontiers Neuroinformatics

BMC Syst. Biol.

Publications

Richard Fitzpatrick, Melanie I. Stefan
Validation Through Collaboration: Encouraging Team Efforts to Ensure Internal and External Validity of Computational Models of Biochemical Pathways. Neuroinformatics 20 (1) (2022)
Stefan Gaillard, Tara van Viegen, Michele Veldsman, Melanie I. Stefan, Veronika Cheplygina
Ten simple rules for failing successfully in academia. PLoS Comput. Biol. 18 (12) (2022)
Dagmar Waltemath, Martin Golebiewski, Michael L. Blinov, Padraig Gleeson, Henning Hermjakob, Michael Hucka, Esther Thea Inau, Sarah M. Keating, Matthias König, Olga Krebs, Rahuman S. Malik-Sheriff, David P. Nickerson, Ernst Oberortner, Herbert M. Sauro, Falk Schreiber, Lucian P. Smith, Melanie I. Stefan, Ulrike Wittig, Chris J. Myers
The first 10 years of the international coordination network for standards in systems and synthetic biology (COMBINE). J. Integr. Bioinform. 17 (2-3) (2020)
Matthew C. Pharris, Neal M. Patel, Tyler G. VanDyk, Thomas M. Bartol, Terrence J. Sejnowski, Mary B. Kennedy, Melanie I. Stefan, Tamara Kinzer-Ursem
A multi-state model of the CaMKII dodecamer suggests a role for calmodulin in maintenance of autophosphorylation. PLoS Comput. Biol. 15 (12) (2019)
Nisha A. Viswan, Gubbi Vani HarshaRani, Melanie I. Stefan, Upinder S. Bhalla
FindSim: A Framework for Integrating Neuronal Data and Signaling Models. Frontiers Neuroinformatics 12 (2018)
Ranjita Dutta Roy, Christian Rosenmund, Melanie I. Stefan
Cooperative binding mitigates the high-dose hook effect. BMC Syst. Biol. 11 (1) (2017)
Kevin S. Bonham, Melanie I. Stefan
Women are underrepresented in computational biology: An analysis of the scholarly literature in biology, computer science and computational biology. PLoS Comput. Biol. 13 (10) (2017)
Nicolas Rodriguez, Jean-Baptiste Pettit, Piero Dalle Pezze, Lu Li, Arnaud Henry, Martijn P. van Iersel, Gaël Jalowicki, Martina Kutmon, Kedar Nath Natarajan, David Tolnay, Melanie I. Stefan, Chris T. A. Evelo, Nicolas Le Novère
The systems biology format converter. BMC Bioinform. 17 (2016)
Melanie I. Stefan, Johanna L. Gutlerner, Richard T. Born, Michael Springer
The Quantitative Methods Boot Camp: Teaching Quantitative Thinking and Computing Skills to Graduate Students in the Life Sciences. PLoS Comput. Biol. 11 (4) (2015)
Melanie I. Stefan, Thomas M. Bartol, Terrence J. Sejnowski, Mary B. Kennedy
Multi-state Modeling of Biomolecules. PLoS Comput. Biol. 10 (9) (2014)
Jacopo Marino, Melanie I. Stefan, Sarah Blackford
Ten Simple Rules for Finishing Your PhD. PLoS Comput. Biol. 10 (12) (2014)
Melanie I. Stefan, Nicolas Le Novère
Cooperative Binding. PLoS Comput. Biol. 9 (6) (2013)
Giovanni Marco Dall'Olio, Jacopo Marino, Michael Schubert, Kevin L. Keys, Melanie I. Stefan, Colin S. Gillespie, Pierre Poulain, Khader Shameer, Robert Sugar, Brandon M. Invergo, Lars Juhl Jensen, Jaume Bertranpetit, Hafid Laayouni
Ten Simple Rules for Getting Help from Online Scientific Communities. PLoS Comput. Biol. 7 (9) (2011)
Chen Li, Marco Donizelli, Nicolas Rodriguez, Harish Dharuri, Lukas Endler, Vijayalakshmi Chelliah, Lu Li, Enuo He, Arnaud Henry, Melanie I. Stefan, Jacky L. Snoep, Michael Hucka, Nicolas Le Novère, Camille Laibe
BioModels Database: An enhanced, curated and annotated resource for published quantitative kinetic models. BMC Syst. Biol. 4 (2010)
Melanie I. Stefan, Stuart J. Edelstein, Nicolas Le Novère
Computing phenomenologic Adair-Klotz constants from microscopic MWC parameters. BMC Syst. Biol. 3 (2009)
Melanie I. Stefan, Nicolas Le Novère
Molecules for memory: modelling CaMKII. BMC Syst. Biol. 1 (S-1) (2007)