Laura Elnitski

Publication Activity (10 Years)

Years Active: 2003-2022
Publications (10 Years): 5

Top Topics

Regulatory Elements

Gene Expression Data

Top Venues

PLoS Comput. Biol.

IEEE ACM Trans. Comput. Biol. Bioinform.

Publications

David O. Holland, Valer Gotea, Kevin Fedkenheuer, Sushil K. Jaiswal, Catherine Baugher, Hua Tan, Michael Fedkenheuer, Laura Elnitski
Characterization and clustering of kinase isoform expression in metastatic melanoma. PLoS Comput. Biol. 18 (5) (2022)
Yun-Ching Chen, Laura Elnitski
Aberrant DNA methylation defines isoform usage in cancer, with functional implications. PLoS Comput. Biol. 15 (7) (2019)
Rami Al-ouran, Robert Schmidt, Ashwini Naik, Jeffrey Jones, Frank Drews, David W. Juedes, Laura Elnitski, Lonnie R. Welch
Discovering Gene Regulatory Elements Using Coverage-Based Heuristics. IEEE ACM Trans. Comput. Biol. Bioinform. 15 (4) (2018)
Yun-Ching Chen, Valer Gotea, Gennady Margolin, Laura Elnitski
Significant associations between driver gene mutations and DNA methylation alterations across many cancer types. PLoS Comput. Biol. 13 (11) (2017)
Jens Lichtenberg, Laura Elnitski, David M. Bodine
SigSeeker: a peak-calling ensemble approach for constructing epigenetic signatures. Bioinform. 33 (17) (2017)
Mary Qu Yang, Laura Elnitski
Orthology-driven mapping of bidirectional promoters in human and mouse genomes. BMC Bioinform. 15 (S-17) (2014)
Laura Elnitski, Jens Lichtenberg, Lonnie R. Welch
in DNA repair pathways. BCB (2010)
Jens Lichtenberg, Kyle Kurz, Xiaoyu Liang, Rami Al-ouran, Lev Neiman, Lee J. Nau, Joshua D. Welch, Edwin Jacox, Thomas Bitterman, Klaus Ecker, Laura Elnitski, Frank Drews, Stephen Lee, Lonnie R. Welch
WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures. BMC Bioinform. 11 (S-12) (2010)
Mary Qu Yang, James Taylor, Laura Elnitski
Comparative analyses of bidirectional promoters in vertebrates. BMC Bioinform. 9 (S-6) (2008)
Jens Lichtenberg, Edwin Jacox, Mary Qu Yang, Laura Elnitski, Lonnie R. Welch
Word-Based Characterization of the Bidirectional Promoters from the Human DNA-Repair Pathway. BIOCOMP (2008)
Mary Qu Yang, James Taylor, Laura Elnitski
Rigorous Mapping of Orthologous Bidirectional Promoters in Vertebrates Defines their Evolutionary History. IMSCCS (2007)
Mary Qu Yang, Laura Elnitski
An Overview of Bidirectional Promoters. BIBE (2007)
Mary Qu Yang, Laura Elnitski
Orthology and Multiple Class Prediction of Functional Elements in the Human Genome. BIOCOMP (2007)
Laura Elnitski, Lonnie R. Welch
New Frontiers in Computational Genomics: Identification of Novel Functional Elements and Genome-scale Pattern Analysis. Scalable Comput. Pract. Exp. 8 (3) (2007)
Mary Qu Yang, Laura Elnitski
Promoter studies in the human genome: one perspective on an unfinished story. BIBE (2007)
Mary Qu Yang, Laura M. Koehly, Laura Elnitski
Comprehensive Annotation of Bidirectional Promoters Identifies Co-Regulation among Breast and Ovarian Cancer Genes. PLoS Comput. Biol. 3 (4) (2007)
Mary Qu Yang, Laura Elnitski
Invited Talk: A Computational Study of Bidirectional Promoters in the Human Genome. ISBRA (2007)
Eli Walters, Naomi S. Altman, Laura Elnitski
Clustering of gene locations. Comput. Stat. Data Anal. 50 (10) (2006)
Laura Elnitski, Belinda Giardine, Prachi Shah, Yi Zhang, Cathy Riemer, Matthew Weirauch, Richard Burhans, Webb Miller, Ross C. Hardison
Improvements to GALA and dbERGE II: databases featuring genomic sequence alignment, annotation and experimental results. Nucleic Acids Res. 33 (Database-Issue) (2005)
Scott Schwartz, Laura Elnitski, Mei Li, Matthew Weirauch, Cathy Riemer, Arian Smit, Eric D. Green, Ross C. Hardison, Webb Miller
MultiPipMaker and supporting tools: alignments and analysis of multiple genomic DNA sequences. Nucleic Acids Res. 31 (13) (2003)