Kyle E. Niemeyer

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 33

Top Topics

Open Source Software

Computing Systems

Partial Differential Equations

Top Venues

J. Comput. Phys.

Comput. Phys. Commun.

Publications

Joanna Piper Morgan, Ilham Variansyah, Samuel L. Pasmann, Kayla B. Clements, Braxton Cuneo, Alexander Mote, Charles Goodman, Caleb Shaw, Jordan Northrop, Rohan Pankaj, Ethan Lame, Benjamin Whewell, Ryan G. McClarren, Todd S. Palmer, Lizhong Chen, Dmitriy Y. Anistratov, C. T. Kelley, Camille J. Palmer, Kyle E. Niemeyer
Monte Carlo / Dynamic Code (MC/DC): An accelerated Python package for fully transient neutron transport and rapid methods development. J. Open Source Softw. 9 (96) (2024)
Nicholas J. Curtis, Kyle E. Niemeyer, Chih-Jen Sung
Accelerating reactive-flow simulations using vectorized chemistry integration. Comput. Phys. Commun. 278 (2022)
Anthony S. Walker, Kyle E. Niemeyer
The Two-Dimensional Swept Rule Applied on Heterogeneous Architectures. CoRR (2021)
Daniel J. Magee, Anthony S. Walker, Kyle E. Niemeyer
Applying the swept rule for solving explicit partial differential equations on heterogeneous computing systems. J. Supercomput. 77 (2) (2021)
Aaron J. Fillo, Jason Schlup, Guillaume Beardsell, Guillaume Blanquart, Kyle E. Niemeyer
A fast, low-memory, and stable algorithm for implementing multicomponent transport in direct numerical simulations. J. Comput. Phys. 406 (2020)
Kyle E. Niemeyer
A project-based course on software development for (engineering) research. CoRR (2019)
Kyle E. Niemeyer
A Project-Based Course on Software Development for (Engineering) Research. ICCS (5) (2019)
Phillip Mestas, Parker Clayton, Kyle E. Niemeyer
pyMARS: automatically reducing chemical kinetic models in Python. J. Open Source Softw. 4 (41) (2019)
Daniel J. Magee, Kyle E. Niemeyer
Applying the swept rule for explicit partial differential equation solutions on heterogeneous computing systems. CoRR (2018)
Christopher P. Stone, Andrew T. Alferman, Kyle E. Niemeyer
Accelerating finite-rate chemical kinetics with coprocessors: Comparing vectorization methods on GPUs, MICs, and CPUs. Comput. Phys. Commun. 226 (2018)
Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin M. Moerman, Pjotr Prins, Karthik Ram, Ariel Rokem, Tracy K. Teal, Roman Valls Guimera, Jacob VanderPlas
Journal of Open Source Software (JOSS): design and first-year review. PeerJ Comput. Sci. 4 (2018)
Daniel S. Katz, Gabrielle Allen, Lorena A. Barba, Devin R. Berg, Holly Bik, Carl Boettiger, Christine L. Borgman, C. Titus Brown, Stuart Buck, Randy Burd, Anita de Waard, Martin Paul Eve, Brian E. Granger, Josh Greenberg, Adina Howe, Bill Howe, May Khanna, Timothy L. Killeen, Matthew S. Mayernik, Erin C. McKiernan, Chris Mentzel, Nirav C. Merchant, Kyle E. Niemeyer, Laura Norén, Sarah M. Nusser, Daniel A. Reed, Edward Seidel, MacKenzie Smith, Jeffrey R. Spies, Matthew J. Turk, John D. Van Horn, Jay Walsh
The principles of tomorrow's university. F1000Research 7 (2018)
Daniel J. Magee, Kyle E. Niemeyer
Accelerating solutions of one-dimensional unsteady PDEs with GPU-based swept time-space decomposition. J. Comput. Phys. 357 (2018)
Nicholas J. Curtis, Kyle E. Niemeyer, Chih-Jen Sung
Using SIMD and SIMT vectorization to evaluate sparse chemical kinetic Jacobian matrices and thermochemical source terms. CoRR (2018)
Daniel S. Katz, Kyle E. Niemeyer, Arfon M. Smith
Publish Your Software: Introducing the Journal of Open Source Software (JOSS). Comput. Sci. Eng. 20 (3) (2018)
Kyle E. Niemeyer, Nicholas J. Curtis, Chih-Jen Sung
pyJac: Analytical Jacobian generator for chemical kinetics. Comput. Phys. Commun. 215 (2017)
Daniel J. Magee, Kyle E. Niemeyer
Accelerating solutions of PDEs with GPU-based swept time-space decomposition. CoRR (2017)
Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin Mattheus Moerman, Pjotr Prins, Karthik Ram, Ariel Rokem, Tracy K. Teal, Roman Valls Guimera, Jacob VanderPlas
Journal of Open Source Software (JOSS): design and first-year review. CoRR (2017)
Bryan W. Weber, Kyle E. Niemeyer
ChemKED: a human- and machine-readable data standard for chemical kinetics experiments. CoRR (2017)
Daniel S. Katz, Kyle E. Niemeyer, Sandra Gesing, Lorraine J. Hwang, Wolfgang Bangerth, Simon Hettrick, Ray Idaszak, Jean Salac, Neil P. Chue Hong, Santiago Núñez Corrales, Alice Allen, R. Stuart Geiger, Jonah Miller, Emily Chen, Anshu Dubey, Patricia Lago
Report on the Fourth Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE4). CoRR (2017)
Jonathan P. Tennant, Jonathan M. Dugan, Daniel Graziotin, Damien C. Jacques, François Waldner, Daniel Mietchen, Yehia Elkhatib, Lauren B. Collister, Christina K. Pikas, Tom Crick, Paola Masuzzo, Anthony Caravaggi, Devin R. Berg, Kyle E. Niemeyer, Tony Ross-Hellauer, Sara Mannheimer, Lillian Rigling, Daniel S. Katz, Bastian Greshake Tzovaras, Josmel Pacheco-Mendoza, Nazeefa Fatima, Marta Poblet, Marios Isaakidis, Dasapta Erwin Irawan, Sébastien Renaut, Christopher R. Madan, Lisa Matthias, Jesper Nørgaard Kjær, Daniel Paul O'Donnell, Cameron Neylon, Sarah Kearns, Manojkumar Selvaraju, Julien Colomb
A multi-disciplinary perspective on emergent and future innovations in peer review. F1000Research 6 (2017)
Arfon M. Smith, Daniel S. Katz, Kyle E. Niemeyer
Software Citation Principles. PeerJ Prepr. 4 (2016)
Kyle E. Niemeyer, Arfon M. Smith, Daniel S. Katz
The challenge and promise of software citation for credit, identification, discovery, and reuse. CoRR (2016)
Kyle E. Niemeyer, Chih-Jen Sung
GPU-Based Parallel Integration of Large Numbers of Independent ODE Systems. CoRR (2016)
Kyle E. Niemeyer, Daniel Magee
An initial investigation of the performance of GPU-based swept time-space decomposition. CoRR (2016)
Daniel S. Katz, Sou-Cheng T. Choi, Kyle E. Niemeyer, James Hetherington, Frank Löffler, Dan Gunter, Ray Idaszak, Steven R. Brandt, Mark A. Miller, Sandra Gesing, Nick D. Jones, Nic Weber, Suresh Marru, Gabrielle Allen, Birgit Penzenstadler, Colin C. Venters, Ethan Davis, Lorraine J. Hwang, Ilian T. Todorov, Abani K. Patra, Miguel de Val-Borro
Report on the Third Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE3). CoRR (2016)
Kyle E. Niemeyer
PyTeCK: a Python-based automatic testing package for chemical kinetic models. SciPy (2016)
Christopher P. Stone, Kyle E. Niemeyer
Accelerating finite-rate chemical kinetics with coprocessors: comparing vectorization methods on GPUs, MICs, and CPUs. CoRR (2016)
Arfon M. Smith, Daniel S. Katz, Kyle E. Niemeyer
Software citation principles. PeerJ Comput. Sci. 2 (2016)
Kyle E. Niemeyer, Arfon M. Smith, Daniel S. Katz
The Challenge and Promise of Software Citation for Credit, Identification, Discovery, and Reuse. ACM J. Data Inf. Qual. 7 (4) (2016)
Kyle E. Niemeyer, Chih-Jen Sung
On the importance of graph search algorithms for DRGEP-based mechanism reduction methods. CoRR (2016)
Daniel S. Katz, Kyle E. Niemeyer, Arfon M. Smith, William L. Anderson, Carl Boettiger, Konrad Hinsen, Rob W. W. Hooft, Michael Hucka, Allen Lee, Frank Löffler, Tom J. Pollard, Fernando Rios
Software vs. data in the context of citation. PeerJ Prepr. 4 (2016)
Nicholas J. Curtis, Kyle E. Niemeyer, Chih-Jen Sung
An investigation of GPU-based stiff chemical kinetics integration methods. CoRR (2016)
Kyle E. Niemeyer, Chih-Jen Sung
Recent progress and challenges in exploiting graphics processors in computational fluid dynamics. J. Supercomput. 67 (2) (2014)
Kyle E. Niemeyer, Chih-Jen Sung
Accelerating moderately stiff chemical kinetics in reactive-flow simulations using GPUs. J. Comput. Phys. 256 (2014)