Melissa Gymrek

Publication Activity (10 Years)

Years Active: 2012-2023
Publications (10 Years): 7

Top Topics

High Throughput

Transcription Factors

Open Source Software

Top Venues

Nat. Mach. Intell.

Publications

Arya R. Massarat, Michael Lamkin, Ciara Reeve, Amy L. Williams, Matteo D'Antonio, Melissa Gymrek
Haptools: a toolkit for admixture and haplotype analysis. Bioinform. 39 (3) (2023)
An Zheng, Michael Lamkin, Hanqing Zhao, Cynthia Wu, Hao Su, Melissa Gymrek
Deep neural networks identify sequence context features predictive of transcription factor binding. Nat. Mach. Intell. 3 (2) (2021)
An Zheng, Michael Lamkin, Yutong Qiu, Kevin Ren, Alon Goren, Melissa Gymrek
A flexible ChIP-sequencing simulation toolkit. BMC Bioinform. 22 (1) (2021)
Nima Mousavi, Jonathan Margoliash, Neha Pusarla, Shubham Saini, Richard Yanicky, Melissa Gymrek
TRTools: a toolkit for genome-wide analysis of tandem repeats. Bioinform. 37 (5) (2021)
Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin M. Moerman, Pjotr Prins, Karthik Ram, Ariel Rokem, Tracy K. Teal, Roman Valls Guimera, Jacob VanderPlas
Journal of Open Source Software (JOSS): design and first-year review. PeerJ Comput. Sci. 4 (2018)
Mehrdad Bakhtiari, Sharona Shleizer-Burko, Melissa Gymrek, Vikas Bansal, Vineet Bafna
Targeted Genotyping of Variable Number Tandem Repeats with AdVNTR. RECOMB (2018)
Arfon M. Smith, Kyle E. Niemeyer, Daniel S. Katz, Lorena A. Barba, George Githinji, Melissa Gymrek, Kathryn D. Huff, Christopher R. Madan, Abigail Cabunoc Mayes, Kevin Mattheus Moerman, Pjotr Prins, Karthik Ram, Ariel Rokem, Tracy K. Teal, Roman Valls Guimera, Jacob VanderPlas
Journal of Open Source Software (JOSS): design and first-year review. CoRR (2017)
Melissa Gymrek
PyBamView: a browser-based application for viewing short read alignments. Bioinform. 30 (23) (2014)
Michal Breker, Melissa Gymrek, Ofer Moldavski, Maya Schuldiner
LoQAtE - Localization and Quantitation ATlas of the yeast proteomE. A new tool for multiparametric dissection of single-protein behavior in response to biological perturbations in yeast. Nucleic Acids Res. 42 (Database-Issue) (2014)
Melissa Gymrek, David Golan, Saharon Rosset, Yaniv Erlich
lobSTR: A Short Tandem Repeat Profiler for Personal Genomes. RECOMB (2012)