Juilee Thakar

Publication Activity (10 Years)

Years Active: 2007-2022
Publications (10 Years): 8

Top Topics

Biological Pathways

Regulatory Networks

Hepatitis C Virus

Top Venues

PLoS Comput. Biol.

Comput. Math. Methods Medicine

Publications

Anna Niarakis, Juilee Thakar, Matteo Barberis, María Rodríguez Martínez, Tomás Helikar, Marc R. Birtwistle, Claudine Chaouiya, Laurence Calzone, Andreas Dräger
Computational modelling in health and disease: highlights of the 6th annual SysMod meeting. Bioinform. 38 (21) (2022)
Mukta G. Palshikar, Shannon P. Hilchey, Martin S. Zand, Juilee Thakar
WikiNetworks: translating manually created biological pathways for topological analysis. Bioinform. 38 (3) (2022)
Matthew N. McCall, Chin-Yi Chu, Lu Wang, Lauren Benoodt, Juilee Thakar, Anthony Corbett, Jeanne Holden-Wiltse, Christopher Slaunwhite, Alex Grier, Steven R. Gill, Ann R. Falsey, David J. Topham, Mary T. Caserta, Edward E. Walsh, Xing Qiu, Thomas J. Mariani
A systems genomics approach uncovers molecular associates of RSV severity. PLoS Comput. Biol. 17 (12) (2021)
Andreas Dräger, Tomás Helikar, Matteo Barberis, Marc Birtwistle, Laurence Calzone, Claudine Chaouiya, Jan Hasenauer, Jonathan R. Karr, Anna Niarakis, María Rodríguez Martínez, Julio Saez-Rodriguez, Juilee Thakar
SysMod: the ISCB community for data-driven computational modelling and multi-scale analysis of biological systems. Bioinform. 37 (21) (2021)
Rohith Palli, Mukta G. Palshikar, Juilee Thakar
Executable pathway analysis using ensemble discrete-state modeling for large-scale data. PLoS Comput. Biol. 15 (9) (2019)
Yun Zhang, David J. Topham, Juilee Thakar, Xing Qiu
FUNNEL-GSEA: FUNctioNal ELastic-net regression in time-course gene set enrichment analysis. Bioinform. 33 (13) (2017)
Atif Ali Khan, Dejan Katanic, Juilee Thakar
Meta-analysis of cell- specific transcriptomic data using fuzzy c-means clustering discovers versatile viral responsive genes. BMC Bioinform. 18 (1) (2017)
Christopher S. Anderson, Marta L. DeDiego, David J. Topham, Juilee Thakar
Boolean Modeling of Cellular and Molecular Pathways Involved in Influenza Infection. Comput. Math. Methods Medicine 2016 (2016)
Jay Khurana, Jay Reeder, Antony Shrimpton, Juilee Thakar
GESPA: classifying nsSNPs to predict disease association. BMC Bioinform. 16 (2015)
Elena Zaslavsky, German Nudelman, Susanna Marquez, Uri Hershberg, Boris M. Hartmann, Juilee Thakar, Stuart C. Sealfon, Steven H. Kleinstein
Reconstruction of regulatory networks through temporal enrichment profiling and its application to H1N1 influenza viral infection. BMC Bioinform. 14 (S-6) (2013)
Juilee Thakar, Ashutosh K. Pathak, Lisa Murphy, Réka Albert, Isabella M. Cattadori
Network Model of Immune Responses Reveals Key Effectors to Single and Co-infection Dynamics by a Respiratory Bacterium and a Gastrointestinal Helminth. PLoS Comput. Biol. 8 (1) (2012)
Mark Kühnel, Luis S. Mayorga, Thomas Dandekar, Juilee Thakar, Roland Schwarz, Elsa Anes, Gareth Griffiths, Jens G. Reich
Modelling phagosomal lipid networks that regulate actin assembly. BMC Syst. Biol. 2 (2008)
István Albert, Juilee Thakar, Song Li, Ranran Zhang, Réka Albert
Boolean network simulations for life scientists. Source Code Biol. Medicine 3 (2008)
Juilee Thakar, Mylisa Pilione, Girish Kirimanjeswara, Eric T. Harvill, Réka Albert
Modeling Systems-Level Regulation of Host Immune Responses. PLoS Comput. Biol. 3 (6) (2007)