Jue Ruan

Publication Activity (10 Years)

Years Active: 2005-2023
Publications (10 Years): 3

Top Topics

Genome Rearrangements

Process Planning

Top Venues

Genom. Proteom. Bioinform.

Publications

Xiumei Xing, Cheng Ai, Tianjiao Wang, Yang Li, Huitao Liu, Pengfei Hu, Guiwu Wang, Huamiao Liu, Hongliang Wang, Ranran Zhang, Junjun Zheng, Xiaobo Wang, Lei Wang, Yuxiao Chang, Qian Qian, Jinghua Yu, Lixin Tang, Shigang Wu, Xiujuan Shao, Alun Li, Peng Cui, Wei Zhan, Sheng Zhao, Zhichao Wu, Xiqun Shao, Yimeng Dong, Min Rong, Yihong Tan, Xuezhe Cui, Shuzhuo Chang, Xingchao Song, Tongao Yang, Limin Sun, Yan Ju, Pei Zhao, Huanhuan Fan, Ying Liu, Xinhui Wang, Wanyun Yang, Min Yang, Tao Wei, Shanshan Song, Jiaping Xu, Zhigang Yue, Qiqi Liang, Chunyi Li, Jue Ruan, Fuhe Yang
The First High-quality Reference Genome of Sika Deer Provides Insights into High-tannin Adaptation. Genom. Proteom. Bioinform. 21 (1) (2023)
Weihua Pan, Jue Ruan
to Completion: What Is An Ideal Reference Genome? Genom. Proteom. Bioinform. 20 (1) (2022)
Jianjun Lu, Cheng Pan, Wei Fan, Wanfei Liu, Huayan Zhao, Donghai Li, Sen Wang, Lianlian Hu, Bing He, Kun Qian, Rui Qin, Jue Ruan, Qiang Lin, Shiyou Lü, Peng Cui
A Chromosome-level Genome Assembly of Wild Castor Provides New Insights into its Adaptive Evolution in Tropical Desert. Genom. Proteom. Bioinform. 20 (1) (2022)
Caihong Zheng, Xuexia Miao, Yanen Li, Ying Huang, Jue Ruan, Xi Ma, Li Wang, Chung-I Wu, Jun Cai
Determination of genomic copy number alteration emphasizing a restriction site-based strategy of genome re-sequencing. Bioinform. 29 (22) (2013)
Zechen Chong, Jue Ruan, Chung-I Wu
Rainbow: an integrated tool for efficient clustering and assembling RAD-seq reads. Bioinform. 28 (21) (2012)
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor T. Marth, Gonçalo R. Abecasis, Richard Durbin
The Sequence Alignment/Map format and SAMtools. Bioinform. 25 (16) (2009)
Jue Ruan, Heng Li, Zhongzhong Chen, Avril Coghlan, Lachlan James M. Coin, Yiran Guo, Jean-Karim Hériché, Yafeng Hu, Karsten Kristiansen, Ruiqiang Li, Tao Liu, Alan Moses, Junjie Qin, Søren Vang, Albert J. Vilella, Abel Ureta-Vidal, Lars Bolund, Jun Wang, Richard Durbin
TreeFam: 2008 Update. Nucleic Acids Res. 36 (Database-Issue) (2008)
Jue Ruan, Yiran Guo, Heng Li, Yafeng Hu, Fei Song, Xin Huang, Karsten Kristiansen, Lars Bolund, Jun Wang
PigGIS: Pig Genomic Informatics System. Nucleic Acids Res. 35 (Database-Issue) (2007)
Heng Li, Avril Coghlan, Jue Ruan, Lachlan James M. Coin, Jean-Karim Hériché, Lara Osmotherly, Ruiqiang Li, Tao Liu, Zhang Zhang, Lars Bolund, Gane Ka-Shu Wong, Wei-Mou Zheng, Paramvir Dehal, Jun Wang, Richard Durbin
TreeFam: a curated database of phylogenetic trees of animal gene families. Nucleic Acids Res. 34 (Database-Issue) (2006)
Jing Wang, Qingyou Xia, Ximiao He, Mingtao Dai, Jue Ruan, Jie Chen, Guo Yu, Haifeng Yuan, Yafeng Hu, Ruiqiang Li, Tao Feng, Chen Ye, Cheng Lu, Jun Wang, Songgang Li, Gane Ka-Shu Wong, Huanming Yang, Jian Wang, Zhonghuai Xiang, Zeyang Zhou, Jun Yu
SilkDB: a knowledgebase for silkworm biology and genomics. Nucleic Acids Res. 33 (Database-Issue) (2005)
Jing Wang, Ximiao He, Jue Ruan, Mingtao Dai, Jie Chen, Yong Zhang, Yafeng Hu, Chen Ye, Shengting Li, Lijuan Cong, Lin Fang, Bin Liu, Songgang Li, Jian Wang, David W. Burt, Gane Ka-Shu Wong, Jun Yu, Huanming Yang, Jun Wang
ChickVD: a sequence variation database for the chicken genome. Nucleic Acids Res. 33 (Database-Issue) (2005)