Gonçalo R. Abecasis

Publication Activity (10 Years)

Years Active: 2000-2022
Publications (10 Years): 8

Top Topics

Biological Data

Linkage Disequilibrium

Association Analysis

Massive Datasets

Top Venues

Publications

Alan Kwong, Andrew P. Boughton, Mukai Wang, Peter Vandehaar, Michael Boehnke, Gonçalo R. Abecasis, Hyun Min Kang
FIVEx: an interactive eQTL browser across public datasets. Bioinform. 38 (2) (2022)
Jonathon Lefaive, Albert V. Smith, Hyun Min Kang, Gonçalo R. Abecasis
Sparse allele vectors and the savvy software suite. Bioinform. 37 (22) (2021)
Andrew P. Boughton, Ryan P. Welch, Matthew Flickinger, Peter Vandehaar, Daniel Taliun, Gonçalo R. Abecasis, Michael Boehnke
LocusZoom.js: interactive and embeddable visualization of genetic association study results. Bioinform. 37 (18) (2021)
Corbin Quick, Christian Fuchsberger, Daniel Taliun, Gonçalo R. Abecasis, Michael Boehnke, Hyun Min Kang
emeraLD: rapid linkage disequilibrium estimation with massive datasets. Bioinform. 35 (1) (2019)
Yong Qian, Thomas J. Butler, Krista Opsahl-Ong, Nicholas S. Giroux, Carlo Sidore, Ramaiah Nagaraja, Francesco Cucca, Luigi Ferrucci, Gonçalo R. Abecasis, David Schlessinger, Jun Ding
fastMitoCalc: an ultra-fast program to estimate mitochondrial DNA copy number from whole-genome sequences. Bioinform. 33 (9) (2017)
Daniel Taliun, Sonia P. Chothani, Sebastian Schönherr, Lukas Forer, Michael Boehnke, Gonçalo R. Abecasis, Chaolong Wang
LASER server: ancestry tracing with genotypes or sequence reads. Bioinform. 33 (13) (2017)
Andrea H. Ramirez, Anthony Philippakis, Gonçalo R. Abecasis, Paul A. Harris, Joshua C. Denny
The All of Us Research Program Researcher Portal: Innovative access to Unprecendented Data. AMIA (2017)
Xiaowei Zhan, Youna Hu, Bingshan Li, Gonçalo R. Abecasis, Dajiang J. Liu
RVTESTS: an efficient and comprehensive tool for rare variant association analysis using sequence data. Bioinform. 32 (9) (2016)
Lam C. Tsoi, James T. Elder, Gonçalo R. Abecasis
Graphical algorithm for integration of genetic and biological data: proof of principle using psoriasis as a model. Bioinform. 31 (8) (2015)
Yancy Lo, Hyun Min Kang, Matthew R. Nelson, Mohammad I. Othman, Stephanie L. Chissoe, Margaret G. Ehm, Gonçalo R. Abecasis, Sebastian Zöllner
Comparing variant calling algorithms for target-exon sequencing in a large sample. BMC Bioinform. 16 (2015)
Christian Fuchsberger, Gonçalo R. Abecasis, David A. Hinds
minimac2: faster genotype imputation. Bioinform. 31 (5) (2015)
Adrian Tan, Gonçalo R. Abecasis, Hyun Min Kang
Unified representation of genetic variants. Bioinform. 31 (13) (2015)
Shuang Feng, Dajiang Liu, Xiaowei Zhan, Mary Kate Wing, Gonçalo R. Abecasis
RAREMETAL: fast and powerful meta-analysis for rare variants. Bioinform. 30 (19) (2014)
Qing Duan, Eric Yi Liu, Paul L. Auer, Guosheng Zhang, Ethan M. Lange, Goo Jun, Chris Bizon, Shuo Jiao, Steven Buyske, Nora Franceschini, Chris S. Carlson, Li Hsu, Alex P. Reiner, Ulrike Peters, Jeffrey Haessler, Keith Curtis, Christina L. Wassel, Jennifer G. Robinson, Lisa W. Martin, Christopher A. Haiman, Loic Le Marchand, Tara Cox Matise, Lucia A. Hindorff, Dana C. Crawford, Themistocles L. Assimes, Hyun Min Kang, Gerardo Heiss, Rebecca D. Jackson, Charles Kooperberg, James G. Wilson, Gonçalo R. Abecasis, Kari E. North, Deborah A. Nickerson, Leslie A. Lange, Yun Li
Imputation of coding variants in African Americans: better performance using data from the exome sequencing project. Bioinform. 29 (21) (2013)
Jian Kang, Kuan-Chieh Huang, Zheng Xu, Yunfei Wang, Gonçalo R. Abecasis, Yun Li
AbCD: arbitrary coverage design for sequencing-based genetic studies. Bioinform. 29 (6) (2013)
Petr Danecek, Adam Auton, Gonçalo R. Abecasis, Cornelis A. Albers, Eric Banks, Mark A. DePristo, Robert E. Handsaker, Gerton Lunter, Gabor T. Marth, Stephen T. Sherry, Gilean McVean, Richard Durbin
The variant call format and VCFtools. Bioinform. 27 (15) (2011)
Randall J. Pruim, Ryan P. Welch, Serena Sanna, Tanya M. Teslovich, Peter S. Chines, Terry P. Gliedt, Michael Boehnke, Gonçalo R. Abecasis, Cristen J. Willer
LocusZoom: regional visualization of genome-wide association scan results. Bioinform. 26 (18) (2010)
Cristen J. Willer, Yun Li, Gonçalo R. Abecasis
METAL: fast and efficient meta-analysis of genomewide association scans. Bioinform. 26 (17) (2010)
Wei Chen, Liming Liang, Gonçalo R. Abecasis
GWAS GUI: graphical browser for the results of whole-genome association studies with high-dimensional phenotypes. Bioinform. 25 (2) (2009)
Heng Li, Bob Handsaker, Alec Wysoker, Tim Fennell, Jue Ruan, Nils Homer, Gabor T. Marth, Gonçalo R. Abecasis, Richard Durbin
The Sequence Alignment/Map format and SAMtools. Bioinform. 25 (16) (2009)
Liming Liang, Sebastian Zöllner, Gonçalo R. Abecasis
GENOME: a rapid coalescent-based whole genome simulator. Bioinform. 23 (12) (2007)
Zhaohui S. Qin, Shyam Gopalakrishnan, Gonçalo R. Abecasis
An efficient comprehensive search algorithm for tagSNP selection using linkage disequilibrium criteria. Bioinform. 22 (2) (2006)
Janis E. Wigginton, Gonçalo R. Abecasis
PEDSTATS: descriptive statistics, graphics and quality assessment for gene mapping data. Bioinform. 21 (16) (2005)
Gonçalo R. Abecasis, Stacey S. Cherny, W. O. C. Cookson, Lon R. Cardon
GRR: graphical representation of relationship errors. Bioinform. 17 (8) (2001)
Gonçalo R. Abecasis, W. O. C. Cookson
GOLD-Graphical Overview of Linkage Disequilibrium. Bioinform. 16 (2) (2000)