Xiaowei Zhan

Publication Activity (10 Years)

Years Active: 2014-2024
Publications (10 Years): 9

Top Topics

Profile Hidden Markov Models

Association Analysis

Reverse K Nearest Neighbor

Histological Images

Top Venues

Briefings Bioinform.

npj Digit. Medicine

Publications

Jingwei Huang, Donghan M. Yang, Ruichen Rong, Kuroush Nezafati, Colin Treager, Zhikai Chi, Shidan Wang, Xian Cheng, Yujia Guo, Laura J. Klesse, Guanghua Xiao, Eric D. Peterson, Xiaowei Zhan, Yang Xie
A critical assessment of using ChatGPT for extracting structured data from clinical notes. npj Digit. Medicine 7 (1) (2024)
Shidan Wang, Ruichen Rong, Zifan Gu, Junya Fujimoto, Xiaowei Zhan, Yang Xie, Guanghua Xiao
Unsupervised domain adaptation for nuclei segmentation: Adapting from hematoxylin & eosin stained slides to immunohistochemistry stained slides using a curriculum approach. Comput. Methods Programs Biomed. 241 (2023)
Kevin C. Lutz, Shuang Jiang, Michael L. Neugent, Nicole J. De Nisco, Xiaowei Zhan, Qiwei Li
A Survey of Statistical Methods for Microbiome Data Analysis. Frontiers Appl. Math. Stat. 8 (2022)
Minzhe Zhang, Thomas Sheffield, Xiaowei Zhan, Qiwei Li, Donghan M. Yang, Yunguan Wang, Shidan Wang, Yang Xie, Tao Wang, Guanghua Xiao
Spatial molecular profiling: platforms, applications and analysis tools. Briefings Bioinform. 22 (3) (2021)
Lina Yang, Shuang Jiang, Bibo Jiang, Dajiang J. Liu, Xiaowei Zhan
Seqminer2: an efficient tool to query and retrieve genotypes for statistical genetics analyses from biobank scale sequence dataset. Bioinform. 36 (19) (2020)
Jiwoong Kim, David E. Greenberg, Reed Pifer, Shuang Jiang, Guanghua Xiao, Samuel A. Shelburne, Andrew Y. Koh, Yang Xie, Xiaowei Zhan
VAMPr: VAriant Mapping and Prediction of antibiotic resistance via explainable features and machine learning. PLoS Comput. Biol. 16 (1) (2020)
He Zhang, Xiaowei Zhan, James Brugarolas, Yang Xie
DEFOR: depth- and frequency-based somatic copy number alteration detector. Bioinform. 35 (19) (2019)
Xiaowei Zhan, Youna Hu, Bingshan Li, Gonçalo R. Abecasis, Dajiang J. Liu
RVTESTS: an efficient and comprehensive tool for rare variant association analysis using sequence data. Bioinform. 32 (9) (2016)
Jiwoong Kim, Min Soo Kim, Andrew Y. Koh, Yang Xie, Xiaowei Zhan
FMAP: Functional Mapping and Analysis Pipeline for metagenomics and metatranscriptomics studies. BMC Bioinform. 17 (2016)
Rui Chen, Qiang Wei, Xiaowei Zhan, Xue Zhong, James S. Sutcliffe, Nancy J. Cox, Edwin H. Cook Jr., Chun Li, Wei Chen, Bingshan Li
A haplotype-based framework for group-wise transmission/disequilibrium tests for rare variant association analysis. Bioinform. 31 (9) (2015)
Qiang Wei, Xiaowei Zhan, Xue Zhong, Yongzhuang Liu, Yujun Han, Wei Chen, Bingshan Li
mutation calling in parents-offspring trios. Bioinform. 31 (9) (2015)
Shuang Feng, Dajiang Liu, Xiaowei Zhan, Mary Kate Wing, Gonçalo R. Abecasis
RAREMETAL: fast and powerful meta-analysis for rare variants. Bioinform. 30 (19) (2014)