Joke Reumers

Publication Activity (10 Years)

Years Active: 2003-2017
Publications (10 Years): 1

Top Topics

Discrete Wavelet Transform

Top Venues

Nucleic Acids Res.

Publications

Marijke Van Moerbeke, Adetayo Kasim, Willem Talloen, Joke Reumers, Hinrich W. H. Göhlmann, Ziv Shkedy
A random effects model for the identification of differential splicing (REIDS) using exon and HTA arrays. BMC Bioinform. 18 (1) (2017)
Bie M. P. Verbist, Lieven Clement, Joke Reumers, Kim Thys, Alexander Vapirev, Willem Talloen, Yves Wetzels, Joris Meys, Jeroen Aerssens, Luc Bijnens, Olivier Thas
ViVaMBC: estimating viral sequence variation in complex populations from illumina deep-sequencing data using model-based clustering. BMC Bioinform. 16 (2015)
Dries Decap, Joke Reumers, Charlotte Herzeel, Pascal Costanza, Jan Fostier
Performance Analysis of a Parallel, Multi-node Pipeline for DNA Sequencing. PPAM (2) (2015)
Koen Van der Borght, Kim Thys, Yves Wetzels, Lieven Clement, Bie M. P. Verbist, Joke Reumers, Herman van Vlijmen, Jeroen Aerssens
QQ-SNV: single nucleotide variant detection at low frequency by comparing the quality quantiles. BMC Bioinform. 16 (2015)
Bie M. P. Verbist, Kim Thys, Joke Reumers, Yves Wetzels, Koen Van der Borght, Willem Talloen, Jeroen Aerssens, Lieven Clement, Olivier Thas
VirVarSeq: a low-frequency virus variant detection pipeline for Illumina sequencing using adaptive base-calling accuracy filtering. Bioinform. 31 (1) (2015)
Dries Decap, Joke Reumers, Charlotte Herzeel, Pascal Costanza, Jan Fostier
Halvade: scalable sequence analysis with MapReduce. Bioinform. 31 (15) (2015)
Ryo Sakai, Matthieu Moisse, Joke Reumers, Jan Aerts
Pipit: visualizing functional impacts of structural variations. Bioinform. 29 (17) (2013)
Andrew Stubbs, Elizabeth A. McClellan, Sebastiaan Horsman, Saskia D. Hiltemann, Ivo Palli, Stephan Nouwens, Anton H. J. Koning, Frits Hoogland, Joke Reumers, Daphne Heijsman, Sigrid Swagemakers, Andreas Kremer, Jules Meijerink, Diether Lambrechts, Peter J. van der Spek
Huvariome: a web server resource of whole genome next-generation sequencing allelic frequencies to aid in pathological candidate gene selection. J. Clin. Bioinform. 2 (2012)
Greet De Baets, Joost J. J. van Durme, Joke Reumers, Sebastian Maurer-Stroh, Peter Vanhee, Joaquín Dopazo, Joost Schymkowitz, Frederic Rousseau
SNPeffect 4.0: on-line prediction of molecular and structural effects of protein-coding variants. Nucleic Acids Res. 40 (Database-Issue) (2012)
Greet De Baets, Joke Reumers, Javier Delgado Blanco, Joaquín Dopazo, Joost Schymkowitz, Frederic Rousseau
An Evolutionary Trade-Off between Protein Turnover Rate and Protein Aggregation Favors a Higher Aggregation Propensity in Fast Degrading Proteins. PLoS Comput. Biol. 7 (6) (2011)
Peter Vanhee, Joke Reumers, Francois Stricher, Lies Baeten, Luis Serrano, Joost Schymkowitz, Frederic Rousseau
PepX: a structural database of non-redundant protein-peptide complexes. Nucleic Acids Res. 38 (Database-Issue) (2010)
Joke Reumers, Joost Schymkowitz, Frederic Rousseau
Using structural bioinformatics to investigate the impact of non synonymous SNPs and disease mutations: scope and limitations. BMC Bioinform. 10 (S-8) (2009)
Lies Baeten, Joke Reumers, Vicente Tur, François Stricher, Tom Lenaerts, Luis Serrano, Frederic Rousseau, Joost Schymkowitz
Reconstruction of Protein Backbones from the BriX Collection of Canonical Protein Fragments. PLoS Comput. Biol. 4 (5) (2008)
Joke Reumers, Lucía Conde, Ignacio Medina, Sebastian Maurer-Stroh, Joost J. J. van Durme, Joaquín Dopazo, Frederic Rousseau, Joost Schymkowitz
Joint annotation of coding and non-coding single nucleotide polymorphisms and mutations in the SNPeffect and PupaSuite databases. Nucleic Acids Res. 36 (Database-Issue) (2008)
Joke Reumers, Joost Schymkowitz, Frederic Rousseau
Using structural bioinformatics to investigate the impact of non synonymous SNPs and disease mutations: scope and limitations. AIMM (2008)
Joke Reumers, Sebastian Maurer-Stroh, Joost Schymkowitz, Frederic Rousseau
SNPeffect v2.0: a new step in investigating the molecular phenotypic effects of human non-synonymous SNPs. Bioinform. 22 (17) (2006)
Lucía Conde, Juan M. Vaquerizas, Hernán Dopazo, Leonardo Arbiza, Joke Reumers, Frederic Rousseau, Joost Schymkowitz, Joaquín Dopazo
PupaSuite: finding functional single nucleotide polymorphisms for large-scale genotyping purposes. Nucleic Acids Res. 34 (Web-Server-Issue) (2006)
Joke Reumers, Joost Schymkowitz, Jesper Ferkinghoff-Borg, Francois Stricher, Luis Serrano, Frederic Rousseau
SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs. Nucleic Acids Res. 33 (Database-Issue) (2005)
Sam Maes, Joke Reumers, Bernard Manderick
Identifiability of Causal Effects in a Multi-Agent Causal Model. IAT (2003)