Jesper Ferkinghoff-Borg

Publication Activity (10 Years)

Years Active: 2005-2022
Publications (10 Years): 6

Top Topics

Protein Structure

Markov Chain Monte Carlo

Top Venues

J. Chem. Inf. Model.

PLoS Comput. Biol.

Publications

Yevgen Zainchkovskyy, Jesper Ferkinghoff-Borg, Anja Bennett, Thomas Egebjerg, Nikolai Lorenzen, Per Greisen Jr., Søren Hauberg, Carsten Stahlhut
Probabilistic thermal stability prediction through sparsity promoting transformer representation. CoRR (2022)
Lisbeth Ravnkilde Kjølbye, Lars Sørensen, Jun Yan, Nils A. Berglund, Jesper Ferkinghoff-Borg, Carol V. Robinson, Birgit Schiøtt
Lipids. J. Chem. Inf. Model. 62 (24) (2022)
Lisbeth Ravnkilde Kjølbye, Leonardo De Maria, Tsjerk A. Wassenaar, Haleh Abdizadeh, Siewert J. Marrink, Jesper Ferkinghoff-Borg, Birgit Schiøtt
General Protocol for Constructing Molecular Models of Nanodiscs. J. Chem. Inf. Model. 61 (6) (2021)
Mathias Engel, James Longden, Jesper Ferkinghoff-Borg, Xavier Robin, Gaye Saginc, Rune Linding
Bowhead: Bayesian modelling of cell velocity during concerted cell migration. PLoS Comput. Biol. 14 (1) (2018)
Jes Frellsen, Ole Winther, Zoubin Ghahramani, Jesper Ferkinghoff-Borg
Bayesian Generalised Ensemble Markov Chain Monte Carlo. AISTATS (2016)
Christian Garde, Martin Welch, Jesper Ferkinghoff-Borg, Thomas Sams
Microbial Biofilm as a Smart Material. Sensors 15 (2) (2015)
Wouter Boomsma, Jesper Ferkinghoff-Borg, Kresten Lindorff-Larsen
Combining Experiments and Simulations Using the Maximum Entropy Principle. PLoS Comput. Biol. 10 (2) (2014)
Wouter Boomsma, Jes Frellsen, Tim Harder, Sandro Bottaro, Kristoffer E. Johansson, Pengfei Tian, Kasper Stovgaard, Christian Andreetta, Simon Olsson, Jan B. Valentin, Lubomir D. Antonov, Anders S. Christensen, Mikael Borg, Jan H. Jensen, Kresten Lindorff-Larsen, Jesper Ferkinghoff-Borg, Thomas Hamelryck
PHAISTOS: A framework for Markov chain Monte Carlo simulation and inference of protein structure. J. Comput. Chem. 34 (19) (2013)
Kasper Stovgaard, Christian Andreetta, Jesper Ferkinghoff-Borg, Thomas Hamelryck
Calculation of accurate small angle X-ray scattering curves from coarse-grained protein models. BMC Bioinform. 11 (2010)
Tom Lenaerts, Jesper Ferkinghoff-Borg, Joost Schymkowitz, Frederic Rousseau
Information theoretical quantification of cooperativity in signalling complexes. BMC Syst. Biol. 3 (2009)
Jes Frellsen, Ida Moltke, Martin Thiim, Kanti V. Mardia, Jesper Ferkinghoff-Borg, Thomas Hamelryck
A Probabilistic Model of RNA Conformational Space. PLoS Comput. Biol. 5 (6) (2009)
Ignacio E. Sánchez, Pedro Beltrão, Francois Stricher, Joost Schymkowitz, Jesper Ferkinghoff-Borg, Frederic Rousseau, Luis Serrano
Genome-Wide Prediction of SH2 Domain Targets Using Structural Information and the FoldX Algorithm. PLoS Comput. Biol. 4 (4) (2008)
Joke Reumers, Joost Schymkowitz, Jesper Ferkinghoff-Borg, Francois Stricher, Luis Serrano, Frederic Rousseau
SNPeffect: a database mapping molecular phenotypic effects of human non-synonymous coding SNPs. Nucleic Acids Res. 33 (Database-Issue) (2005)