Kresten Lindorff-Larsen

Publication Activity (10 Years)

Years Active: 2009-2021
Publications (10 Years): 6

Top Topics

Maximum Entropy

Markov Chain Monte Carlo

Ensemble Learning

Top Venues

PLoS Comput. Biol.

J. Comput. Chem.

J. Chem. Inf. Model.

Publications

Giulio Tesei, João M. Martins, Micha B. A. Kunze, Yong Wang, Ramon Crehuet, Kresten Lindorff-Larsen
DEER-PREdict: Software for efficient calculation of spin-labeling EPR and NMR data from conformational ensembles. PLoS Comput. Biol. 17 (1) (2021)
Andreas Haahr Larsen, Yong Wang, Sandro Bottaro, Sergei Grudinin, Lise Arleth, Kresten Lindorff-Larsen
Combining molecular dynamics simulations with small-angle X-ray and neutron scattering data to study multi-domain proteins in solution. PLoS Comput. Biol. 16 (4) (2020)
James S. Fraser, Kresten Lindorff-Larsen, Massimiliano Bonomi
What Will Computational Modeling Approaches Have to Say in the Era of Atomistic Cryo-EM Data? J. Chem. Inf. Model. 60 (5) (2020)
Ramon Crehuet, Pedro J. Buigues, Xavier Salvatella, Kresten Lindorff-Larsen
Bayesian-Maximum-Entropy Reweighting of IDP Ensembles Based on NMR Chemical Shifts. Entropy 21 (9) (2019)
Kresten Lindorff-Larsen
An automatic seating plan algorithm. PeerJ Prepr. 6 (2018)
Matteo Tiberti, Elena Papaleo, Tone Bengtsen, Wouter Boomsma, Kresten Lindorff-Larsen
ENCORE: Software for Quantitative Ensemble Comparison. PLoS Comput. Biol. 11 (10) (2015)
Wouter Boomsma, Jesper Ferkinghoff-Borg, Kresten Lindorff-Larsen
Combining Experiments and Simulations Using the Maximum Entropy Principle. PLoS Comput. Biol. 10 (2) (2014)
Gaetano Invernizzi, Matteo Tiberti, Matteo Lambrughi, Kresten Lindorff-Larsen, Elena Papaleo
Communication Routes in ARID Domains between Distal Residues in Helix 5 and the DNA-Binding Loops. PLoS Comput. Biol. 10 (9) (2014)
Wouter Boomsma, Jes Frellsen, Tim Harder, Sandro Bottaro, Kristoffer E. Johansson, Pengfei Tian, Kasper Stovgaard, Christian Andreetta, Simon Olsson, Jan B. Valentin, Lubomir D. Antonov, Anders S. Christensen, Mikael Borg, Jan H. Jensen, Kresten Lindorff-Larsen, Jesper Ferkinghoff-Borg, Thomas Hamelryck
PHAISTOS: A framework for Markov chain Monte Carlo simulation and inference of protein structure. J. Comput. Chem. 34 (19) (2013)
David E. Shaw, Ron O. Dror, John K. Salmon, J. P. Grossman, Kenneth M. Mackenzie, Joseph A. Bank, Cliff Young, Martin M. Deneroff, Brannon Batson, Kevin J. Bowers, Edmond Chow, Michael P. Eastwood, Doug Ierardi, John L. Klepeis, Jeffrey Kuskin, Richard H. Larson, Kresten Lindorff-Larsen, Paul Maragakis, Mark A. Moraes, Stefano Piana, Yibing Shan, Brian Towles
Millisecond-scale molecular dynamics simulations on Anton. SC (2009)
David E. Shaw, Ron O. Dror, John K. Salmon, J. P. Grossman, Kenneth M. Mackenzie, Joseph A. Bank, Cliff Young, Martin M. Deneroff, Brannon Batson, Kevin J. Bowers, Edmond Chow, Michael P. Eastwood, Doug Ierardi, John L. Klepeis, Jeffrey Kuskin, Richard H. Larson, Kresten Lindorff-Larsen, Paul Maragakis, Mark A. Moraes, Stefano Piana, Yibing Shan, Brian Towles
Millisecond-scale molecular dynamics simulations on Anton. SC (2009)