Matteo Tiberti

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 8

Top Topics

Electron Micrographs

Protein Structural

Gene Prediction

Top Venues

Briefings Bioinform.

J. Chem. Inf. Model.

PLoS Comput. Biol.

Publications

Mona Nourbakhsh, Kristine Degn, Astrid Saksager, Matteo Tiberti, Elena Papaleo
Prediction of cancer driver genes and mutations: the potential of integrative computational frameworks. Briefings Bioinform. 25 (2) (2024)
Valentina Sora, Matteo Tiberti, Ludovica Beltrame, Deniz Dogan, Shahriyar Mahdi Robbani, Joshua Rubin, Elena Papaleo
PyInteraph2 and PyInKnife2 to Analyze Networks in Protein Structural Ensembles. J. Chem. Inf. Model. 63 (14) (2023)
Kristine Degn, Ludovica Beltrame, Matteo Tiberti, Elena Papaleo
PDBminer to Find and Annotate Protein Structures for Computational Analysis. J. Chem. Inf. Model. 63 (23) (2023)
Mona Nourbakhsh, Astrid Saksager, Nikola Tom, Xi Steven Chen, Antonio Colaprico, Catharina Olsen, Matteo Tiberti, Elena Papaleo
A workflow to study mechanistic indicators for driver gene prediction with Moonlight. Briefings Bioinform. 24 (5) (2023)
Matteo Tiberti, Thilde Terkelsen, Kristine Degn, Ludovica Beltrame, Tycho Canter Cremers, Isabelle da Piedade, Miriam Di Marco, Emiliano Maiani, Elena Papaleo
saturation mutagenesis of protein structures and structural ensembles. Briefings Bioinform. 23 (3) (2022)
Matteo Tiberti, Alessandro Pandini, Franca Fraternali, Arianna Fornili
In silico identification of rescue sites by double force scanning. Bioinform. 34 (2) (2018)
Shaima Hashem, Matteo Tiberti, Arianna Fornili
Allosteric modulation of cardiac myosin dynamics by omecamtiv mecarbil. PLoS Comput. Biol. 13 (11) (2017)
Matteo Tiberti, Elena Papaleo, Tone Bengtsen, Wouter Boomsma, Kresten Lindorff-Larsen
ENCORE: Software for Quantitative Ensemble Comparison. PLoS Comput. Biol. 11 (10) (2015)
Matteo Tiberti, Gaetano Invernizzi, Matteo Lambrughi, Yuval Inbar, Gideon Schreiber, Elena Papaleo
PyInteraph: A Framework for the Analysis of Interaction Networks in Structural Ensembles of Proteins. J. Chem. Inf. Model. 54 (5) (2014)
Gaetano Invernizzi, Matteo Tiberti, Matteo Lambrughi, Kresten Lindorff-Larsen, Elena Papaleo
Communication Routes in ARID Domains between Distal Residues in Helix 5 and the DNA-Binding Loops. PLoS Comput. Biol. 10 (9) (2014)
Marco Pasi, Matteo Tiberti, Alberto Arrigoni, Elena Papaleo
xPyder: A PyMOL Plugin To Analyze Coupled Residues and Their Networks in Protein Structures. J. Chem. Inf. Model. 52 (7) (2012)