Jean-Philippe Doyon

Publication Activity (10 Years)

Years Active: 2007-2016
Publications (10 Years): 1

Top Topics

Gene Duplication

Microarray Data

Bayesian Inference

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Algorithms Mol. Biol.

Publications

François Chevenet, Jean-Philippe Doyon, Céline Scornavacca, Edwin Jacox, Emmanuelle Jousselin, Vincent Berry
SylvX: a viewer for phylogenetic tree reconciliations. Bioinform. 32 (4) (2016)
Thi Hau Nguyen, Vincent Ranwez, Stéphanie Pointet, Anne-Muriel Arigon Chifolleau, Jean-Philippe Doyon, Vincent Berry
Reconciliation and local gene tree rearrangement can be of mutual profit. Algorithms Mol. Biol. 8 (2013)
Jean-Philippe Doyon, Sylvie Hamel, Cédric Chauve
An Efficient Method for Exploring the Space of Gene Tree/Species Tree Reconciliations in a Probabilistic Framework. IEEE ACM Trans. Comput. Biol. Bioinform. 9 (1) (2012)
Thi Hau Nguyen, Jean-Philippe Doyon, Stéphanie Pointet, Anne-Muriel Arigon Chifolleau, Vincent Ranwez, Vincent Berry
Accounting for Gene Tree Uncertainties Improves Gene Trees and Reconciliation Inference. WABI (2012)
Jean-Philippe Doyon, Vincent Ranwez, Vincent Daubin, Vincent Berry
Models, algorithms and programs for phylogeny reconciliation. Briefings Bioinform. 12 (5) (2011)
Jean-Philippe Doyon, Céline Scornavacca, K. Yu. Gorbunov, Gergely J. Szöllosi, Vincent Ranwez, Vincent Berry
An Efficient Algorithm for Gene/Species Trees Parsimonious Reconciliation with Losses, Duplications and Transfers. RECOMB-CG (2010)
Jean-Philippe Doyon, Cédric Chauve, Sylvie Hamel
Space of Gene/Species Trees Reconciliations and Parsimonious Models. J. Comput. Biol. 16 (10) (2009)
Cédric Chauve, Jean-Philippe Doyon, Nadia El-Mabrouk
Gene Family Evolution by Duplication, Speciation, and Loss. J. Comput. Biol. 15 (8) (2008)
Jean-Philippe Doyon, Cédric Chauve, Sylvie Hamel
Algorithms for Exploring the Space of Gene Tree/Species Tree Reconciliations. RECOMB-CG (2008)
Cédric Chauve, Jean-Philippe Doyon, Nadia El-Mabrouk
Inferring a Duplication, Speciation and Loss History from a Gene Tree (Extended Abstract). RECOMB-CG (2007)