James Borneman

Publication Activity (10 Years)

Years Active: 2001-2020
Publications (10 Years): 1

Top Topics

Commercial Software

Algorithmic Approaches

Top Venues

Stat. Anal. Data Min.

Publications

Qi Fu, Elizabeth Bent, James Borneman, Marek Chrobak, Neal E. Young
Algorithmic approaches to selecting control clones in DNA array hybridization experiments. CoRR (2020)
Yu-Ting Huang, Jiue-in Yang, Marek Chrobak, James Borneman
PRISE2: Software for designing sequence-selective PCR primers and probes. BMC Bioinform. 15 (2014)
Olga Tanaseichuk, James Borneman, Tao Jiang
Phylogeny-based classification of microbial communities. Bioinform. 30 (4) (2014)
Zhanpan Zhang, Xinping Cui, Daniel R. Jeske, James Borneman
Biclustering scatter plots using data depth measures. Stat. Anal. Data Min. 6 (2) (2013)
Olga Tanaseichuk, James Borneman, Tao Jiang
Separating metagenomic short reads into genomes via clustering. Algorithms Mol. Biol. 7 (2012)
Olga Tanaseichuk, James Borneman, Tao Jiang
A Probabilistic Approach to Accurate Abundance-Based Binning of Metagenomic Reads. WABI (2012)
Paul M. Ruegger, Gianluca Della Vedova, Tao Jiang, James Borneman
Improving Probe Set Selection for Microbial Community Analysis by Leveraging Taxonomic Information of Training Sequences. BMC Bioinform. 12 (2011)
Olga Tanaseichuk, James Borneman, Tao Jiang
Separating Metagenomic Short Reads into Genomes via Clustering - (Extended Abstract). WABI (2011)
Wei Li, Paul M. Ruegger, James Borneman, Tao Jiang
Polony Identification Using the EM Algorithm Based on a Gaussian Mixture Model. BIBE (2010)
Zhanpan Zhang, Xinping Cui, Daniel R. Jeske, Xiaoxiao Li, Jonathan Braun, James Borneman
Clustering Scatter Plots Using Data Depth Measures. DMIN (2010)
Qi Fu, Elizabeth Bent, James Borneman, Marek Chrobak, Neal E. Young
Algorithmic Approaches to Selecting Control Clones in DNA Array Hybridization Experiments. J. Bioinform. Comput. Biol. 5 (4) (2007)
Qi Fu, Elizabeth Bent, James Borneman, Marek Chrobak, Neal E. Young
Algorithmic Approaches to Selecting Control Clones in DNA Array Hybridization Experiments. APBC (2007)
Zheng Liu, Xin Chen, James Borneman, Tao Jiang
A Fast Algorithm for Approximate String Matching on Gene Sequences. CPM (2005)
Katechan Jampachaisri, Lea Valinsky, James Borneman, S. James Press
Classification of oligonucleotide fingerprints: application for microbial community and gene expression analyses. Bioinform. 21 (14) (2005)
Zheng Liu, James Borneman, Tao Jiang
A software system for gene sequence database construction based on fast approximate string matching. Int. J. Bioinform. Res. Appl. 1 (3) (2005)
Andres Figueroa, James Borneman, Tao Jiang
Clustering Binary Fingerprint Vectors with Missing Values for DNA Array Data Analysis. J. Comput. Biol. 11 (5) (2004)
Andres Figueroa, James Borneman, Tao Jiang
Clustering Binary Fingerprint Vectors with Missing Values for DNA Array Data Analysis. CSB (2003)
James Borneman, Marek Chrobak, Gianluca Della Vedova, Andres Figueroa, Tao Jiang
Probe selection algorithms with applications in the analysis of microbial communities. ISMB (Supplement of Bioinformatics) (2001)