Irit Gat-Viks

Publication Activity (10 Years)

Years Active: 2003-2020
Publications (10 Years): 6

Top Topics

Biological Processes

Gene Expression Data Analysis

High Throughput

Top Venues

PLoS Comput. Biol.

J. Comput. Biol.

Publications

Maya Levy, Amit Frishberg, Irit Gat-Viks
Inferring cellular heterogeneity of associations from single cell genomics. Bioinform. 36 (11) (2020)
Yael Steuerman, Irit Gat-Viks
Revealing the Genetic Basis of Immune Traits in the Absence of Experimental Immunophenotyping. RECOMB (2016)
Yael Steuerman, Irit Gat-Viks
Exploiting Gene-Expression Deconvolution to Probe the Genetics of the Immune System. PLoS Comput. Biol. 12 (4) (2016)
Amit Frishberg, Avital Brodt, Yael Steuerman, Irit Gat-Viks
ImmQuant: a user-friendly tool for inferring immune cell-type composition from gene-expression data. Bioinform. 32 (24) (2016)
Roni Wilentzik, Irit Gat-Viks
A Novel Probabilistic Methodology for eQTL Analysis of Signaling Networks. RECOMB (2015)
Amit Frishberg, Yael Steuerman, Irit Gat-Viks
CoD: inferring immune-cell quantities related to disease states. Bioinform. 31 (24) (2015)
Arnon Mazza, Irit Gat-Viks, Roded Sharan
Elucidating Influenza Inhibition Pathways via Network Reconstruction. J. Comput. Biol. 21 (5) (2014)
Avital Brodt, Maya Botzman, Eyal David, Irit Gat-Viks
Dissecting Dynamic Genetic Variation That Controls Temporal Gene Response in Yeast. PLoS Comput. Biol. 10 (12) (2014)
Arnon Mazza, Irit Gat-Viks, Hesso Farhan, Roded Sharan
A minimum-labeling approach for reconstructing protein networks across multiple conditions. Algorithms Mol. Biol. 9 (2014)
Arnon Mazza, Irit Gat-Viks, Hesso Farhan, Roded Sharan
A Minimum-Labeling Approach for Reconstructing Protein Networks across Multiple Conditions. WABI (2013)
Irit Gat-Viks, Renana Meller, Martin Kupiec, Ron Shamir
Understanding Gene Sequence Variation in the Context of Transcription Regulation in Yeast. RECOMB (2011)
Ewa Szczurek, Florian Markowetz, Irit Gat-Viks, Przemyslaw Biecek, Jerzy Tiuryn, Martin Vingron
Deregulation upon DNA damage revealed by joint analysis of context-specific perturbation data. BMC Bioinform. 12 (2011)
Michal Ziv-Ukelson, Irit Gat-Viks, Ydo Wexler, Ron Shamir
A Faster Algorithm for Simultaneous Alignment and Folding of RNA. J. Comput. Biol. 17 (8) (2010)
Irit Gat-Viks, Martin Vingron
Evidence for Gene-Specific Rather Than Transcription Rate-Dependent Histone H3 Exchange in Yeast Coding Regions. PLoS Comput. Biol. 5 (2) (2009)
Michal Ziv-Ukelson, Irit Gat-Viks, Ydo Wexler, Ron Shamir
A Faster Algorithm for RNA Co-folding. WABI (2008)
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Shamir
A Probabilistic Methodology for Integrating Knowledge and Experiments on Biological Networks. J. Comput. Biol. 13 (2) (2006)
Irit Gat-Viks, Richard M. Karp, Ron Shamir, Roded Sharan
Reconstructing Chain Functions in Genetic Networks. SIAM J. Discret. Math. 20 (3) (2006)
Irit Gat-Viks, Amos Tanay, Daniela Raijman, Ron Shamir
The Factor Graph Network Model for Biological Systems. RECOMB (2005)
Irit Gat-Viks, Amos Tanay, Ron Shamir
Modeling and Analysis of Heterogeneous Regulation in Biological Networks. Regulatory Genomics (2004)
Irit Gat-Viks, Amos Tanay, Ron Shamir
Modeling and Analysis of Heterogeneous Regulation in Biological Networks. J. Comput. Biol. 11 (6) (2004)
Irit Gat-Viks, Ron Shamir, Richard M. Karp, Roded Sharan
Reconstructing Chain Functions in Genetic Networks. Pacific Symposium on Biocomputing (2004)
Irit Gat-Viks, Roded Sharan, Ron Shamir
Scoring clustering solutions by their biological relevance. Bioinform. 19 (18) (2003)
Irit Gat-Viks, Ron Shamir
Chain functions and scoring functions in genetic networks. ISMB (Supplement of Bioinformatics) (2003)