A Faster Algorithm for RNA Co-folding.
Michal Ziv-UkelsonIrit Gat-ViksYdo WexlerRon ShamirPublished in: WABI (2008)
Keyphrases
- learning algorithm
- computational complexity
- preprocessing
- worst case
- rna secondary structure prediction
- cost function
- optimization algorithm
- optimal solution
- detection algorithm
- theoretical analysis
- objective function
- highly efficient
- tree structure
- clustering method
- high accuracy
- computational cost
- experimental evaluation
- significant improvement
- expectation maximization
- linear programming
- simulated annealing
- times faster
- recognition algorithm
- improved algorithm
- k means