Hui Liu

Publication Activity (10 Years)

Years Active: 2009-2024
Publications (10 Years): 12

Top Topics

Protein Interaction

Computational Model

Top Venues

IEEE ACM Trans. Comput. Biol. Bioinform.

Nucleic Acids Res.

Publications

Xinyu Fan, Hui Liu, Hongdang Zheng, Jingfang Zhai, Lin Zhang
DaCSeg: Divide and conquer for accurate overlapping chromosome instance segmentation in metaphase cell images. Biomed. Signal Process. Control. 89 (2024)
Xianfang Song, Yong Zhang, Dunwei Gong, Hui Liu, Wanqiu Zhang
Surrogate Sample-Assisted Particle Swarm Optimization for Feature Selection on High-Dimensional Data. IEEE Trans. Evol. Comput. 27 (3) (2023)
Shutao Chen, Lin Zhang, Xiangzhi Chen, Hui Liu
FGFICA: Independent Component Analysis of Fusion Genomic Features for Mining Epi-Transcriptome Profiling Data. IEEE ACM Trans. Comput. Biol. Bioinform. 20 (3) (2023)
Jiani Ma, Chen Li, Yiwen Zhang, Zhikang Wang, Shanshan Li, Yuming Guo, Lin Zhang, Hui Liu, Xin Gao, Jiangning Song
MULGA, a unified multi-view graph autoencoder-based approach for identifying drug-protein interaction and drug repositioning. Bioinform. 39 (9) (2023)
Honglei Wang, Hui Liu, Tao Huang, Gangshen Li, Lin Zhang, Yanjing Sun
EMDLP: Ensemble multiscale deep learning model for RNA methylation site prediction. BMC Bioinform. 23 (1) (2022)
Shutao Chen, Lin Zhang, Lin Lu, Jia Meng, Hui Liu
FBCwPlaid: A Functional Biclustering Analysis of Epi-Transcriptome Profiling Data Via a Weighted Plaid Model. IEEE ACM Trans. Comput. Biol. Bioinform. 19 (3) (2022)
Xiangyu Wu, Zhen Wei, Kunqi Chen, Qing Zhang, Jionglong Su, Hui Liu, Lin Zhang, Jia Meng
m6Acomet: large-scale functional prediction of individual m6A RNA methylation sites from an RNA co-methylation network. BMC Bioinform. 20 (1) (2019)
Xing Chen, Ya-Zhou Sun, Hui Liu, Lin Zhang, Jian-Qiang Li, Jia Meng
RNA methylation and diseases: experimental results, databases, Web servers and computational models. Briefings Bioinform. 20 (3) (2019)
Hui Liu, Huaizhi Wang, Zhen Wei, Songyao Zhang, Gang Hua, Shao-Wu Zhang, Lin Zhang, Shou-Jiang Gao, Jia Meng, Xing Chen, Yufei Huang
MeT-DB V2.0: elucidating context-specific functions of N6-methyl-adenosine methyltranscriptome. Nucleic Acids Res. 46 (Database-Issue) (2018)
Lin Zhang, Hui Liu, Yufei Huang, Xuesong Wang, Yidong Chen, Jia Meng
Cancer Progression Prediction Using Gene Interaction Regularized Elastic Net. IEEE ACM Trans. Comput. Biol. Bioinform. 14 (1) (2017)
Xiaodong Cui, Zhen Wei, Lin Zhang, Hui Liu, Lei Sun, Shaowu Zhang, Yufei Huang, Jia Meng
Sketching the distribution of transcriptomic features on RNA transcripts with Travis coordinates. BIBM (2015)
Hui Liu, Mario A. Flores, Jia Meng, Lin Zhang, Xinyu Zhao, Manjeet K. Rao, Yidong Chen, Yufei Huang
MeT-DB: a database of transcriptome methylation in mammalian cells. Nucleic Acids Res. 43 (Database-Issue) (2015)
Lin Zhang, Jia Meng, Hui Liu, Xiaodong Cui, Shao-Wu Zhang, Yidong Chen, Yufei Huang
Detecting differentially methylated mRNA from MeRIP-Seq with likelihood ratio test. GlobalSIP (2014)
Yu-Chen Zhang, Shao-Wu Zhang, Lian Liu, Lin Zhang, Hui Liu, Xiaodong Cui, Yufei Huang, Jia Meng
Differential analysis of RNA methylome with improved spatial resolution. GlobalSIP (2014)
Jia Meng, Xiaodong Cui, Hui Liu, Lin Zhang, Shaowu Zhang, Manjeet K. Rao, Yidong Chen, Yufei Huang
Unveiling the dynamics in RNA epigenetic regulations. BIBM (2013)
Lin Zhang, Hui Liu, Jia Meng, Xuesong Wang, Yidong Chen, Yufei Huang
Integration of gene expression, genome wide DNA methylation, and gene networks for clinical outcome prediction in ovarian cancer. BIBM (2013)
Lin Zhang, Hui Liu, Tzu-Hung Hsiao, Yidong Chen, Yufei Huang
An investigation of clinical outcome prediction from integrative genomic profiles in ovarian cancer. GENSiPS (2012)
Lin Zhang, Jia Meng, Hui Liu, Yufei Huang
Clustering DNA methylation expressions using nonparametric beta mixture model. GENSiPS (2011)
Lin Zhang, Hui Liu, Dong Yue, Hui He, Yufei Huang
miRNA Target Prediction Method Based on the Combination of Multiple Algorithms. ICIC (1) (2010)
Hui Liu, Lin Zhang, Qilong Sun, Yidong Chen, Yufei Huang
SysMicrO: A Novel Systems Approach for miRNA Target Prediction. ICIC (2) (2010)
Dong Yue, Hui Liu, Mingzhu Lu, Philip Chen, Yidong Chen, Yufei Huang
A Bayesian decision fusion approach for microRNA target prediction. BCB (2010)
Hui Liu, Dong Yue, Yidong Chen, Shou-Jiang Gao, Yufei Huang
Improving performance of mammalian microRNA target prediction. BMC Bioinform. 11 (2010)
Hui Liu, Dong Yue, Yidong Chen, Yufei Huang
A comprehensive study of a SVM-based miRNA target prediction algorithm. GENSiPS (2009)
Hui Liu, Lin Zhang, Shou-Jiang Gao, Yufei Huang
A Bayesian Approach for Identifying miRNA Targets by Combining Sequence Prediction and Expression Profiling. IJCBS (2009)