Halima Bensmail

Publication Activity (10 Years)

Years Active: 1997-2024
Publications (10 Years): 35

Top Topics

Biological Networks

Top Venues

Briefings Bioinform.

Publications

Mostafa M. Hamza, Ehsan Ullah, Abdelkader Baggag, Halima Bensmail, Michael Sedlmair, Michaël Aupetit
ClustML: A measure of cluster pattern complexity in scatterplots learnt from human-labeled groupings. Inf. Vis. 23 (2) (2024)
Nisreen Said Amer, Samir Brahim Belhaouari, Halima Bensmail
Progressive Fourier Transform (PFT): Enhancing Time-Frequency Representation of EEG signals for Stress and Seizure Detection. BIBM (2023)
Edin Salkovic, Mohammad Amin Sadeghi, Abdelkader Baggag, Ahmed Gamal Rashed Salem, Halima Bensmail
OutSingle: a novel method of detecting and injecting outliers in RNA-Seq count data using the optimal hard threshold for singular values. Bioinform. 39 (4) (2023)
Mohammad Mominur Rahman, Ashhadul Islam, Skander Charni, Halima Bensmail, Thomas Hilbel, Samir Brahim Belhaouari
A Novel Feature Extraction Technique for ECG Arrhythmia Classification Using ML. DASC/PiCom/CBDCom/CyberSciTech (2023)
Ashhadul Islam, Samir Brahim Belhaouari, Atiq ur Rehman, Halima Bensmail
K Nearest Neighbor OveRsampling approach: An open source python package for data augmentation. Softw. Impacts 12 (2022)
Ashhadul Islam, Samir Brahim Belhaouari, Atiq ur Rehman, Halima Bensmail
KNNOR: An oversampling technique for imbalanced datasets. Appl. Soft Comput. 115 (2022)
Mostafa M. Abbas, Ehsan Ullah, Abdelkader Baggag, Halima Bensmail, Michael Sedlmair, Michaël Aupetit
ClustRank: a Visual Quality Measure Trained on Perceptual Data for Sorting Scatterplots by Cluster Patterns. CoRR (2021)
Heesoo Park, Adnan Ali, Raghvendra Mall, Halima Bensmail, Stefano Sanvito, Fedwa El-Mellouhi
Data-driven enhancement of cubic phase stability in mixed-cation perovskites. Mach. Learn. Sci. Technol. 2 (2) (2021)
Fuyi Li, Jinxiang Chen, Zongyuan Ge, Ya Wen, Yanwei Yue, Morihiro Hayashida, Abdelkader Baggag, Halima Bensmail, Jiangning Song
Computational prediction and interpretation of both general and specific types of promoters in Escherichia coli by exploiting a stacked ensemble-learning framework. Briefings Bioinform. 22 (2) (2021)
Edin Salkovic, Halima Bensmail
A Novel Bayesian Outlier Score Based on the Negative Binomial Distribution for Detecting Aberrantly Expressed Genes in RNA-Seq Gene Expression Count Data. IEEE Access 9 (2021)
Türker Tuncer, Sengül Dogan, Fatih Özyurt, Samir Brahim Belhaouari, Halima Bensmail
Novel Multi Center and Threshold Ternary Pattern Based Method for Disease Detection Method Using Voice. IEEE Access 8 (2020)
Zhen Chen, Pei Zhao, Fuyi Li, Yanan Wang, Alexander Ian Smith, Geoffrey I. Webb, Tatsuya Akutsu, Abdelkader Baggag, Halima Bensmail, Jiangning Song
Comprehensive review and assessment of computational methods for predicting RNA post-transcriptional modification sites from RNA sequences. Briefings Bioinform. 21 (5) (2020)
Abdurrahman Elbasir, Raghvendra Mall, Khalid Kunji, Reda Rawi, Zeyaul Islam, Gwo-Yu Chuang, Prasanna R. Kolatkar, Halima Bensmail
BCrystal: an interpretable sequence-based protein crystallization predictor. Bioinform. 36 (5) (2020)
Zhen Chen, Pei Zhao, Fuyi Li, André Leier, Tatiana T. Marquez-Lago, Geoffrey I. Webb, Abdelkader Baggag, Halima Bensmail, Jiangning Song
PROSPECT: A web server for predicting protein histidine phosphorylation sites. J. Bioinform. Comput. Biol. 18 (4) (2020)
Edin Salkovic, Mostafa M. Abbas, Samir Brahim Belhaouari, Khaoula Errafii, Halima Bensmail
OutPyR: Bayesian inference for RNA-Seq outlier detection. J. Comput. Sci. 47 (2020)
Abdurrahman Elbasir, Balasubramanian Moovarkumudalvan, Khalid Kunji, Prasanna R. Kolatkar, Raghvendra Mall, Halima Bensmail
DeepCrystal: a deep learning framework for sequence-based protein crystallization prediction. Bioinform. 35 (13) (2019)
Ishita K. Khan, Aashish Jain, Reda Rawi, Halima Bensmail, Daisuke Kihara
Prediction of protein group function by iterative classification on functional relevance network. Bioinform. 35 (8) (2019)
Ehsan Ullah, Michaël Aupetit, Arun Das, Abhishek Patil, Nooral Al Muftah, Reda Rawi, Mohamad Saad, Halima Bensmail
KinVis: a visualization tool to detect cryptic relatedness in genetic datasets. Bioinform. 35 (15) (2019)
Mostafa M. Abbas, Michaël Aupetit, Michael Sedlmair, Halima Bensmail
ClustMe: A Visual Quality Measure for Ranking Monochrome Scatterplots based on Cluster Patterns. Comput. Graph. Forum 38 (3) (2019)
Michaël Aupetit, Michael Sedlmair, Mostafa M. Abbas, Abdelkader Baggag, Halima Bensmail
Toward Perception-Based Evaluation of Clustering Techniques for Visual Analytics. IEEE VIS (Short Papers) (2019)
Raghvendra Mall, Ehsan Ullah, Khalid Kunji, Michele Ceccarelli, Halima Bensmail
An unsupervised disease module identification technique in biological networks using novel quality metric based on connectivity, conductance and modularity. F1000Research 7 (2018)
Abdurrahman Elbasir, Balasubramanian Moovarkumudalvan, Khalid Kunji, Prasanna R. Kolatkar, Halima Bensmail, Raghvendra Mall
DeepCrystal: A Deep Learning Framework for Sequence-based Protein Crystallization Prediction. BIBM (2018)
Mostafa M. Abbas, Thanh Le, Halima Bensmail, Vasant G. Honavar, Yasser El-Manzalawy
Microbiomarkers Discovery in Inflammatory Bowel Diseases using Network-Based Feature Selection. BCB (2018)
Hossam Al Meer, Raghvendra Mall, Ehsan Ullah, Nasreddine Megrez, Halima Bensmail
ISaaC: Identifying Structural Relations in Biological Data with Copula-Based Kernel Dependency Measures. IWBBIO (1) (2018)
Sameer Khurana, Reda Rawi, Khalid Kunji, Gwo-Yu Chuang, Halima Bensmail, Raghvendra Mall
DeepSol: a deep learning framework for sequence-based protein solubility prediction. Bioinform. 34 (15) (2018)
Raghvendra Mall, Ehsan Ullah, Khalid Kunji, Halima Bensmail, Michele Ceccarelli
An adaptive refinement for community detection methods for disease module identification in biological networks using novel metric based on connectivity, conductance & modularity. BIBM (2017)
Ehsan Ullah, Raghvendra Mall, Halima Bensmail, Reda Rawi, Saila Shama, Nooral Al Muftah, Ian Richard Thmpson
Identification of cancer drug sensitivity biomarkers. BIBM (2017)
Raghvendra Mall, Luigi Cerulo, Halima Bensmail, Antonio Iavarone, Michele Ceccarelli
Detection of statistically significant network changes in complex biological networks. BMC Syst. Biol. 11 (1) (2017)
Abdelkader Baggag, Halima Bensmail, Jaideep Srivastava
Advanced Computation of Sparse Precision Matrices for Big Data. PAKDD (2) (2017)
Raghvendra Mall, Ehsan Ullah, Khalid Kunji, Fulvio D'Angelo, Halima Bensmail, Michele Ceccarelli
Differential Community Detection in Paired Biological Networks. BCB (2017)
Raghvendra Mall, Halima Bensmail, Rocco Langone, Carolina Varon, Johan A. K. Suykens
Denoised Kernel Spectral data Clustering. IJCNN (2016)
Michaël Aupetit, Ehsan Ullah, Reda Rawi, Halima Bensmail
A design study to identify inconsistencies in kinship information: The case of the 1000 Genomes project. PacificVis (2016)
Raghvendra Mall, Laure Berti-Équille, Halima Bensmail
Metabolomic Data Profiling for Diabetes Research in Qatar. DEXA Workshops (2016)
Ehsan Ullah, Raghvendra Mall, Reda Rawi, Halima Bensmail
Statistical and Network Analysis of Metabolomics Data. BCB (2016)
Reda Rawi, Raghvendra Mall, Khalid Kunji, Mohammed El Anbari, Michaël Aupetit, Ehsan Ullah, Halima Bensmail
COUSCOus: improved protein contact prediction using an empirical Bayes covariance estimator. BMC Bioinform. 17 (2016)
Jingbin Wang, Yihua Zhou, Kanghong Duan, Jim Jing-Yan Wang, Halima Bensmail
Supervised Cross-Modal Factor Analysis for Multiple Modal Data Classification. SMC (2015)
Reda Rawi, Khalid Kunji, Abdelali Haoudi, Halima Bensmail
Residue-residue contact prediction in the HIV-1 envelope glycoprotein complex. BIBM (2015)
Mohammed El Anbari, Sidra Alam, Halima Bensmail
COFADMM: A Computational Features Selection with Alternating Direction Method of Multipliers. ICCS (2014)
Jim Jing-Yan Wang, Halima Bensmail, Xin Gao
Feature selection and multi-kernel learning for sparse representation on a manifold. Neural Networks 51 (2014)
Jim Jing-Yan Wang, Halima Bensmail
Unified framework for representing and ranking. Pattern Recognit. 47 (6) (2014)
Jim Jing-Yan Wang, Yijun Sun, Halima Bensmail
Domain transfer nonnegative matrix factorization. IJCNN (2014)
Mohammed El Anbari, Nawel Nemmour, Othmane Bouhali, Reda Rawi, Ali Sheharyar, Halima Bensmail
Computational Neuro-Modeling of Visual Memory: Multimodal Imaging and Analysis. Brain Informatics and Health (2014)
Jim Jing-Yan Wang, Halima Bensmail, Xin Gao
Joint learning and weighting of visual vocabulary for bag-of-feature based tissue classification. Pattern Recognit. 46 (12) (2013)
Zeinab Atieh, Karsten Suhre, Halima Bensmail
-NMR Spectra. ICCS (2013)
Jim Jing-Yan Wang, Halima Bensmail
Cross-domain sparse coding. CIKM (2013)
Jim Jing-Yan Wang, Halima Bensmail, Nan Yao, Xin Gao
Discriminative sparse coding on multi-manifolds. Knowl. Based Syst. 54 (2013)
Jim Jing-Yan Wang, Halima Bensmail, Xin Gao
Multiple graph regularized nonnegative matrix factorization. Pattern Recognit. 46 (10) (2013)
Raghvendra Mall, Johan A. K. Suykens, Mohammed El Anbari, Halima Bensmail
Primal-Dual Framework for Feature Selection using Least Squares Support Vector Machines. COMAD (2013)
Jingyan Wang, Halima Bensmail, Xin Gao
Multiple graph regularized protein domain ranking. BMC Bioinform. 13 (2012)
Halima Bensmail, Samreen Anjum, Othmane Bouhali, Mohammed El Anbari
RAFNI: Robust Analysis of Functional NeuroImages with Non-normal α-Stable Error. ICONIP (1) (2012)
Halima Bensmail, Jennifer Golek, Michelle M. Moody, O. John Semmes, Abdelali Haoudi
A novel approach for clustering proteomics data using Bayesian fast Fourier transform. Bioinform. 21 (10) (2005)
Zhenqiu Liu, Dechang Chen, Halima Bensmail, Ying Xu
Clustering Gene Expression Data with Kernel Principal Components. J. Bioinform. Comput. Biol. 3 (2) (2005)
Halima Bensmail, Jacqueline J. Meulman
Model-based Clustering with Noise: Bayesian Inference and Estimation. J. Classif. 20 (1) (2003)
Halima Bensmail, Gilles Celeux, Adrian E. Raftery, Christian P. Robert
Inference in model-based cluster analysis. Stat. Comput. 7 (1) (1997)