Haidong Lan

Publication Activity (10 Years)

Years Active: 2014-2022
Publications (10 Years): 13

Top Topics

Sequence Alignment

Top Venues

Publications

Haidong Lan, Wenxi Zhu, Du Wu, Qian Qiu, Honglin Zhu, Jingjing Zhao, Xinghui Fu, Liu Wei, Jintao Meng, Minwen Deng
Efficient Phase-Functioned Real-time Character Control in Mobile Games: A TVM Enabled Approach. ICPP (2022)
Liangzhen Zheng, Jintao Meng, Kai Jiang, Haidong Lan, Zechen Wang, Mingzhi Lin, Weifeng Li, Hongwei Guo, Yanjie Wei, Yuguang Mu
Improving protein-ligand docking and screening accuracies by incorporating a scoring function correction term. Briefings Bioinform. 23 (3) (2022)
Jintao Meng, Chen Zhuang, Peng Chen, Mohamed Wahib, Bertil Schmidt, Xiao Wang, Haidong Lan, Dou Wu, Minwen Deng, Yanjie Wei, Shengzhong Feng
Automatic Generation of High-Performance Convolution Kernels on ARM CPUs for Deep Learning. IEEE Trans. Parallel Distributed Syst. 33 (11) (2022)
Zekun Yin, Hao Zhang, Meiyang Liu, Wen Zhang, Honglei Song, Haidong Lan, Yanjie Wei, Beifang Niu, Bertil Schmidt, Weiguo Liu
RabbitQC: high-speed scalable quality control for sequencing data. Bioinform. 37 (4) (2021)
Liangzhen Zheng, Haidong Lan, Tao Shen, Jiaxiang Wu, Sheng Wang, Wei Liu, Junzhou Huang
tFold-TR: Combining Deep Learning Enhanced Hybrid Potential Energy for Template-Based Modelling Structure Refinement. CoRR (2021)
Jiaxiang Wu, Shitong Luo, Tao Shen, Haidong Lan, Sheng Wang, Junzhou Huang
EBM-Fold: Fully-Differentiable Protein Folding Powered by Energy-based Models. CoRR (2021)
Haidong Lan, Jintao Meng, Christian Hundt, Bertil Schmidt, Minwen Deng, Xiaoning Wang, Weiguo Liu, Yu Qiao, Shengzhong Feng
FeatherCNN: Fast Inference Computation with TensorGEMM on ARM Architectures. IEEE Trans. Parallel Distributed Syst. 31 (3) (2020)
Jikai Zhang, Haidong Lan, Yuandong Chan, Yuan Shang, Bertil Schmidt, Weiguo Liu
BGSA: a bit-parallel global sequence alignment toolkit for multi-core and many-core architectures. Bioinform. 35 (13) (2019)
Bin Yang, Xu Ji, Xiaosong Ma, Xiyang Wang, Tianyu Zhang, Xiupeng Zhu, Nosayba El-Sayed, Haidong Lan, Yibo Yang, Jidong Zhai, Weiguo Liu, Wei Xue
End-to-end I/O Monitoring on a Leading Supercomputer. NSDI (2019)
Haidong Lan, Weiguo Liu, Yongchao Liu, Bertil Schmidt
SWhybrid: A Hybrid-Parallel Framework for Large-Scale Protein Sequence Database Search. IPDPS (2017)
Yuandong Chan, Kai Xu, Haidong Lan, Weiguo Liu, Yongchao Liu, Bertil Schmidt
PUNAS: A Parallel Ungapped-Alignment-Featured Seed Verification Algorithm for Next-Generation Sequencing Read Alignment. IPDPS (2017)
Haidong Lan, Yuandong Chan, Kai Xu, Bertil Schmidt, Shaoliang Peng, Weiguo Liu
Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters. BMC Bioinform. 17 (S-9) (2016)
Haidong Lan, Weiguo Liu, Bertil Schmidt, Bingqiang Wang
Accelerating large-scale biological database search on Xeon Phi-based neo-heterogeneous architectures. BIBM (2015)
Quangang Zheng, Haidong Lan, Weiguo Liu
XPFS: A new parallel PROSITE profile search algorithm on Xeon Phi. BIBM (2014)
Lipeng Wang, Yuandong Chan, Xiaohui Duan, Haidong Lan, Xiangxu Meng, Weiguo Liu
XSW: Accelerating Biological Database Search on Xeon Phi. IPDPS Workshops (2014)