Yuandong Chan

Publication Activity (10 Years)

Years Active: 2014-2020
Publications (10 Years): 9

Top Topics

Hierarchically Organized

Biological Data

Greatly Reduce The Number

Sequence Alignment

Top Venues

Publications

Xiaoming Xu, Yuandong Chan, Kai Xu, Jikai Zhang, Xiaoning Wang, Zekun Yin, Weiguo Liu
SLPal: Accelerating Long Sequence Alignment on Many-Core and Multi-Core Architectures. BIBM (2020)
Jikai Zhang, Haidong Lan, Yuandong Chan, Yuan Shang, Bertil Schmidt, Weiguo Liu
BGSA: a bit-parallel global sequence alignment toolkit for multi-core and many-core architectures. Bioinform. 35 (13) (2019)
Zekun Yin, Hao Zhang, Kai Xu, Yuandong Chan, Shaoliang Peng, Xiaoning Wang, Bertil Schmidt, Weiguo Liu
XLCS: A New Bit-Parallel Longest Common Subsequence Algorithm on Xeon Phi Clusters. HPCC/SmartCity/DSS (2019)
Kai Xu, Zhenya Song, Yuandong Chan, Shida Wang, Xiangxu Meng, Weiguo Liu, Wei Xue
Refactoring and Optimizing WRF Model on Sunway TaihuLight. ICPP (2019)
Haowen Zhang, Yuandong Chan, Kaichao Fan, Bertil Schmidt, Weiguo Liu
Fast and efficient short read mapping based on a succinct hash index. BMC Bioinform. 19 (1) (2018)
Kai Xu, Robin Kobus, Yuandong Chan, Ping Gao, Xiangxu Meng, Yanjie Wei, Bertil Schmidt, Weiguo Liu
SPECTR: Scalable Parallel Short Read Error Correction on Multi-core and Many-core Architectures. ICPP (2018)
Yuandong Chan, Kai Xu, Haidong Lan, Weiguo Liu, Yongchao Liu, Bertil Schmidt
PUNAS: A Parallel Ungapped-Alignment-Featured Seed Verification Algorithm for Next-Generation Sequencing Read Alignment. IPDPS (2017)
Xiaohui Duan, Kai Xu, Yuandong Chan, Christian Hundt, Bertil Schmidt, Pavan Balaji, Weiguo Liu
S-Aligner: Ultrascalable Read Mapping on Sunway Taihu Light. CLUSTER (2017)
Haidong Lan, Yuandong Chan, Kai Xu, Bertil Schmidt, Shaoliang Peng, Weiguo Liu
Parallel algorithms for large-scale biological sequence alignment on Xeon-Phi based clusters. BMC Bioinform. 17 (S-9) (2016)
Lipeng Wang, Yuandong Chan, Xiaohui Duan, Haidong Lan, Xiangxu Meng, Weiguo Liu
XSW: Accelerating Biological Database Search on Xeon Phi. IPDPS Workshops (2014)