Gultekin Özsoyoglu

Publication Activity (10 Years)

Years Active: 1981-2017
Publications (10 Years): 3

Top Venues

BIBM

Bioinform.

ASONAM

BCB

Publications

Kamil Topal, Mehmet Koyutürk, Gultekin Özsoyoglu
Effects of emotion and topic area on topic shifts in social media discussions. Soc. Netw. Anal. Min. 7 (1) (2017)
Kamil Topal, Mehmet Koyutürk, Gultekin Özsoyoglu
Emotion -and area-driven topic shift analysis in social media discussions. ASONAM (2016)
Kamil Topal, Gultekin Özsoyoglu
Movie review analysis: Emotion analysis of IMDb movie reviews. ASONAM (2016)
Eamon Johnson, W. Christopher Baughman, Gultekin Özsoyoglu
A method for imputation of semantic class in diagnostic radiology text. BIBM (2015)
A. Ercüment Çiçek, Kathryn Roeder, Gultekin Özsoyoglu
MIRA: mutual information-based reporter algorithm for metabolic networks. Bioinform. 31 (7) (2015)
Eamon Johnson, W. Christopher Baughman, Gultekin Özsoyoglu
A distributional approach to summarization of radiology reports. BIBM (2015)
A. Ercüment Çiçek, Kathryn Roeder, Gultekin Özsoyoglu
MIRA: mutual information-based reporter algorithm for metabolic networks. Bioinform. 30 (12) (2014)
Abdullah Ercument Cicek, Xinjian Qi, Ali Cakmak, Stephen R. Johnson, Xu Han, Sami Alshalwi, Zehra Meral Özsoyoglu, Gultekin Özsoyoglu
An online system for metabolic network analysis. Database J. Biol. Databases Curation 2014 (2014)
Stephen R. Johnson, Xinjian Qi, A. Ercüment Çiçek, Gultekin Özsoyoglu
: An iPad interface for KEGG metabolic pathways. Health Inf. Sci. Syst. 1 (1) (2013)
Eamon Johnson, W. Christopher Baughman, Gultekin Özsoyoglu
Modeling Incidental Findings in Radiology Records. BCB (2013)
Sarp A. Coskun, A. Ercüment Çiçek, Nicola Lai, Ranjan K. Dash, Z. Meral Özsoyoglu, Gultekin Özsoyoglu
An online model composition tool for system biology models. BMC Syst. Biol. 7 (2013)
Xinjian Qi, Gultekin Özsoyoglu
Locating basic bio-entities in genome-scale reconstructed metabolic networks. BIBM (2013)
A. Ercüment Çiçek, Ilya Bederman, Leigh Henderson, Mitchell L. Drumm, Gultekin Özsoyoglu
ADEMA: An Algorithm to Determine Expected Metabolite Level Alterations Using Mutual Information. PLoS Comput. Biol. 9 (1) (2013)
A. Ercüment Çiçek, Xinjian Qi, Ali Cakmak, Stephen R. Johnson, Xu Han, Sami Alshalwi, Gultekin Özsoyoglu
PathCase-MAW: An Online Metabolic Network Analysis Workbench. BCB (2013)
Sarp A. Coskun, Xinjian Qi, Ali Cakmak, En Cheng, A. Ercüment Çiçek, Lei Yang, Rishiraj Jadeja, Ranjan K. Dash, Nicola Lai, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
PathCase-SB: integrating data sources and providing tools for systems biology research. BMC Syst. Biol. 6 (2012)
A. Ercüment Çiçek, Gultekin Özsoyoglu
Observation Conflict Resolution in steady-State metabolic Network Dynamics Analysis. J. Bioinform. Comput. Biol. 10 (1) (2012)
Ali Cakmak, Xinjian Qi, A. Ercüment Çiçek, Ilya Bederman, Leigh Henderson, Mitchell L. Drumm, Gultekin Özsoyoglu
A New metabolomics Analysis Technique: steady-State metabolic Network Dynamics Analysis. J. Bioinform. Comput. Biol. 10 (1) (2012)
Ali Cakmak, Xinjian Qi, A. Ercüment Çiçek, Gultekin Özsoyoglu
Computational interpretation of metabolomics measurements: steady-state metabolic network dynamics analysis. BCB (2011)
Ali Cakmak, Xinjian Qi, Sarp A. Coskun, Mitali Das, En Cheng, A. Ercüment Çiçek, Nicola Lai, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
PathCase-SB architecture and database design. BMC Syst. Biol. 5 (2011)
A. Ercüment Çiçek, Gultekin Özsoyoglu
Resolving observation conflicts in steady state metabolic network dynamics analysis. BCB (2011)
Ali Cakmak, Gultekin Özsoyoglu, Richard W. Hanson
Querying metabolism under Different Physiological Constraints. J. Bioinform. Comput. Biol. 8 (2) (2010)
Brendan Elliott, Stephen Mayes, Ali Cakmak, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
Advanced querying interface for biochemical network databases. SAC (2010)
Ali Cakmak, Mustafa Kirac, Gultekin Özsoyoglu
PopulusLog: People information database. ISCIS (2009)
Nattakarn Ratprasartporn, Jonathan Po, Ali Cakmak, Sulieman Bani-Ahmad, Gultekin Özsoyoglu
Context-based literature digital collection search. VLDB J. 18 (1) (2009)
Ali Cakmak, Arun Dsouza, Richard W. Hanson, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
A web-based data source for metabolomics. ISCIS (2009)
Brendan Elliott, Mustafa Kirac, Ali Cakmak, Gökhan Yavas, Stephen Mayes, En Cheng, Yuan Wang, Chirag Gupta, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
, 'PathCase pathways database system', Bioinformatics 2008, 24(21) 2526-2533. Bioinform. 25 (20) (2009)
Chirag Gupta, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
Efficient k-word proximity search. ISCIS (2009)
Cheng Luo, Zhewei Jiang, Wen-Chi Hou, Gultekin Özsoyoglu
Progressive Evaluation of XML Queries for Online Aggregation and Progress Indicator. DEXA (2009)
Sulieman Bani-Ahmad, Gultekin Özsoyoglu
On content-driven search-keyword suggesters for literature digital libraries. JCDL (2008)
Mustafa Kirac, Gultekin Özsoyoglu
Protein Function Prediction Based on Patterns in Biological Networks. RECOMB (2008)
Ali Cakmak, Gultekin Özsoyoglu
Taxonomy-superimposed graph mining. EDBT (2008)
Ali Cakmak, Gultekin Özsoyoglu
Discovering gene annotations in biomedical text databases. BMC Bioinform. 9 (2008)
Sulieman Bani-Ahmad, Gultekin Özsoyoglu
elGiza, a research-pyramid based search tool for vertical literature digital libraries. ICDE Workshops (2008)
Brendan Elliott, Mustafa Kirac, Ali Cakmak, Gökhan Yavas, Stephen Mayes, En Cheng, Yuan Wang, Chirag Gupta, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
PathCase: pathways database system. Bioinform. 24 (21) (2008)
Ali Cakmak, Gultekin Özsoyoglu
Mining biological networks for unknown pathways. Bioinform. 23 (20) (2007)
Ali Cakmak, Mustafa Kirac, Marc R. Reynolds, Z. Meral Özsoyoglu, Gultekin Özsoyoglu
Gene Ontology-Based Annotation Analysis and Categorization of Metabolic Pathways. SSDBM (2007)
Ali Cakmak, Gultekin Özsoyoglu
Annotating Genes Using Textual Patterns. Pacific Symposium on Biocomputing (2007)
Nattakarn Ratprasartporn, Gultekin Özsoyoglu
Finding Related Papers in Literature Digital Libraries. ECDL (2007)
Nattakarn Ratprasartporn, Sulieman Bani-Ahmad, Ali Cakmak, Jonathan Po, Gultekin Özsoyoglu
Evaluating Different Ranking Functions for Context-Based Literature Search. ICDE Workshops (2007)
Sulieman Bani-Ahmad, Gultekin Özsoyoglu
Improved Publication Scores for Online Digital Libraries Via Research Pyramids. ECDL (2007)
Nattakarn Ratprasartporn, Ali Cakmak, Gultekin Özsoyoglu
On Data and Visualization Models for Signaling Pathways. SSDBM (2006)
Mustafa Kirac, Gultekin Özsoyoglu, Jiong Yang
Annotating proteins by mining protein interaction networks. ISMB (Supplement of Bioinformatics) (2006)
Mustafa Kirac, Ali Cakmak, Gultekin Özsoyoglu
Task-Oriented Integrated Use of Biological Web Data Sources. SSDBM (2006)
Sun S. Chung, Gultekin Özsoyoglu
Anti-Tamper Databases: Processing Aggregate Queries over Encrypted Databases. ICDE Workshops (2006)
Sulieman Bani-Ahmad, Ali Cakmak, Gultekin Özsoyoglu, Abdullah Al-Hamdani
Evaluating Publication Similarity Measures. IEEE Data Eng. Bull. 28 (4) (2005)
Sulieman Bani-Ahmad, Ali Cakmak, Abdullah Al-Hamdani, Gultekin Özsoyoglu
Evaluating Score and Publication Similarity Functions in Digital Libraries. ICADL (2005)
John Chmura, Nattakarn Ratprasartporn, Gultekin Özsoyoglu
Scalability of Databases for Digital Libraries. ICADL (2005)
Gultekin Özsoyoglu
Letter from the Special Issue Editor. IEEE Data Eng. Bull. 28 (4) (2005)
Gultekin Özsoyoglu, Ismail Sengör Altingövde, Abdullah Al-Hamdani, Selma Ayse Özel, Özgür Ulusoy, Z. Meral Özsoyoglu
Querying web metadata: Native score management and text support in databases. ACM Trans. Database Syst. 29 (4) (2004)
Selma Ayse Özel, Ismail Sengör Altingövde, Özgür Ulusoy, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
Metadata-based modeling of information resources on the Web. J. Assoc. Inf. Sci. Technol. 55 (2) (2004)
Z. Meral Özsoyoglu, Joseph H. Nadeau, Gultekin Özsoyoglu, Murat Tasan
Towards an Integrated Software System for Biological Pathways. IEEE Data Eng. Bull. 27 (4) (2004)
Gultekin Özsoyoglu, Nevzat Hurkan Balkir, Z. Meral Özsoyoglu, Graham Cormode
On Automated Lesson Construction from Electronic Textbooks. IEEE Trans. Knowl. Data Eng. 16 (3) (2004)
Z. Meral Özsoyoglu, Joseph H. Nadeau, Gultekin Özsoyoglu
Pathways Database System. OMICS 7 (1) (2003)
Gultekin Özsoyoglu, Abdullah Al-Hamdani
Web Information Resource Discovery: Past, Present, and Future. ISCIS (2003)
Wei Yu, Z. Meral Özsoyoglu, Gultekin Özsoyoglu
XML Restructuring and Integration for Tabular Data. DEXA (2003)
Wanhong Xu, Larkshmi Krishnamurthy, Murat Tasan, Gultekin Özsoyoglu, Joseph H. Nadeau, Z. Meral Özsoyoglu, Greg Schaeffer
Pathways Database System: An Integrated Set of Tools for Biological Pathways. SAC (2003)
Gultekin Özsoyoglu, David A. Singer, Sun S. Chung
Anti-Tamper Databases: Querying Encrypted Databases. DBSec (2003)
Larkshmi Krishnamurthy, Joseph H. Nadeau, Gultekin Özsoyoglu, Z. Meral Özsoyoglu, Greg Schaeffer, Murat Tasan, Wanhong Xu
Pathways Database System: An Integrated System for Biological Pathways. Bioinform. 19 (8) (2003)
Abdullah Al-Hamdani, Gultekin Özsoyoglu
Selecting Topics for Web Resource Discovery: Efficiency Issues in a Database Approach. DEXA (2003)
Gultekin Özsoyoglu, Abdullah Al-Hamdani, Ismail Sengör Altingövde, Selma Ayse Özel, Özgür Ulusoy, Z. Meral Özsoyoglu
Sideway Value Algebra for Object-Relational Databases. VLDB (2002)
Nevzat Hurkan Balkir, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
A Graphical Query Language: VISUAL and Its Query Processing. IEEE Trans. Knowl. Data Eng. 14 (5) (2002)
Ismail Sengör Altingövde, Selma Ayse Özel, Özgür Ulusoy, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
Topic-Centric Querying of Web Information Resources. DEXA (2001)
Gultekin Özsoyoglu, Nevzat Hurkan Balkir, Graham Cormode, Z. Meral Özsoyoglu
Electronic Books in Digital Libraries. ADL (2000)
Taekyong Lee, Lei Sheng, Nevzat Hurkan Balkir, Abdullah Al-Hamdani, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
Query Processing Techniques for Multimedia Presentations. Multim. Tools Appl. 11 (1) (2000)
Lei Sheng, Z. Meral Özsoyoglu, Gultekin Özsoyoglu
A Graph Query Language and Its Query Processing. ICDE (1999)
Taekyong Lee, Lei Sheng, Tolga Bozkaya, Nevzat Hurkan Balkir, Z. Meral Özsoyoglu, Gultekin Özsoyoglu
Querying Multimedia Presentations Based on Content. IEEE Trans. Knowl. Data Eng. 11 (3) (1999)
Veli Hakkoymaz, Joel Kraft, Gultekin Özsoyoglu
Constraint-Based Automation of Multimedia Presentation Assembly. Multim. Syst. 7 (6) (1999)
Richard T. Snodgrass, Serge Abiteboul, Sophie Cluet, Michael J. Franklin, Guy M. Lohman, David B. Lomet, Gultekin Özsoyoglu, Raghu Ramakrishnan, Kenneth A. Ross, Timos K. Sellis, Patrick Valduriez
Reminiscences on Influential Papers. SIGMOD Rec. 28 (1) (1999)
Huang-Cheng Kuo, Gultekin Özsoyoglu
Selecting Actions to Trigger in Active Database Applications. DEXA (1998)
Nevzat Hurkan Balkir, Gultekin Özsoyoglu
Multimedia Presentation Servers: Buffer Management and Admission Control. IW-MMDBMS (1998)
Taekyong Lee, Gultekin Özsoyoglu
Query Processing Techniques for Multimedia Presentation Graphs. RIDE (1998)
Nevzat Hurkan Balkir, Gultekin Özsoyoglu
Delivering Presentations from Multimedia Servers. VLDB J. 7 (4) (1998)
Erdogan Dogdu, Gultekin Özsoyoglu
Scheduling Nested Transactions in Real-Time Database System. RTDB (1997)
Veli Hakkoymaz, Gultekin Özsoyoglu
A Constraint-Driven Approach to Automate the Organization and Playout of Presentations in Multimedia Databases. Multim. Tools Appl. 4 (2) (1997)
Yoohwan Kim, Ju-Yeon Jo, Virgilio B. Velasco Jr., Nicholas A. Barendt, Andy Podgurski, Gultekin Özsoyoglu, Frank L. Merat
A flexible software architecture for agile manufacturing. ICRA (1997)
Erdogan Dogdu, Gultekin Özsoyoglu
Real-Time Transactions with Execution Histories: Priority Assignment and Load Control. CIKM (1997)
Frank L. Merat, Nick A. Barendt, Roger D. Quinn, Greg C. Causey, Wyatt S. Newman, Virgilio B. Velasco Jr., Andy Podgurski, Yoohwan Kim, Gultekin Özsoyoglu, Ju-Yeon Jo
Advances in agile manufacturing. ICRA (1997)
Sungkil Lee, Huang-Cheng Kuo, Nevzat Hurkan Balkir, Gultekin Özsoyoglu
A database server architecture for agile manufacturing. ICRA (1997)
Taekyong Lee, Tolga Bozkaya, Huang-Cheng Kuo, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
A Scientific Multimedia Database System for Polymer Science Experiments. SSDBM (1996)
Sungkil Lee, Gultekin Özsoyoglu
Distributed Processing of Time-Constrained Queries in CASE-DB. CIKM (1996)
Erdogan Dogdu, Gultekin Özsoyoglu
Adaptive real-time transactions and risk-based load control. DART@CIKM (1996)
Nevzat Hurkan Balkir, Eser Sükan, Gultekin Özsoyoglu, Z. Meral Özsoyoglu
VISUAL: A Graphical Icon-Based Query Language. ICDE (1996)
Veli Hakkoymaz, Gultekin Özsoyoglu
Automating the Organization of Presentations for Playout Management in Multimedia Databases. IW-MMDBMS (1996)
Huang-Cheng Kuo, Gultekin Özsoyoglu
A Framework for Cooperative Real-Time Transactions. RTDB (1996)
Gultekin Özsoyoglu, Veli Hakkoymaz, Joel Kraft
Automating the Assembly of Presentations from Multimedia Databases. ICDE (1996)
Gultekin Özsoyoglu, Sujatha Guru Swamy, Kaizheng Du, Wen-Chi Hou
Time-Constrained Query Processing in CASE-DB. IEEE Trans. Knowl. Data Eng. 7 (6) (1995)
Gultekin Özsoyoglu, Richard T. Snodgrass
Temporal and Real-Time Databases: A Survey. IEEE Trans. Knowl. Data Eng. 7 (4) (1995)
Gultekin Özsoyoglu, Richard T. Snodgrass
Guest Editors' Introduction to Special Section On Temporal and Real-Time Databases. IEEE Trans. Knowl. Data Eng. 7 (4) (1995)
Nasser Yazdani, Z. Meral Özsoyoglu, Gultekin Özsoyoglu
A Framework for Feature-Based Indexing for Spatial Databases. SSDBM (1994)
Gultekin Özsoyoglu, Z. Meral Özsoyoglu, Kumar V. Vadaparty
A Scientific Database System for Polymers and Materials Engineering Needs. SSDBM (1994)
Kaizheng Du, Gultekin Özsoyoglu
Modifying Datbase Queries and Error Constraints. DEXA (1993)
Gultekin Özsoyoglu, Huaqing Wang
Example-Based Graphical Database Query Languages. Computer 26 (5) (1993)
Wen-Chi Hou, Gultekin Özsoyoglu
Processing Time-Constrained Aggregate Queries in CASE-DB. ACM Trans. Database Syst. 18 (2) (1993)
Gultekin Özsoyoglu, Aladdin Hafez
Near-Optimum Storage Models for Nested Relations Based on Workload Information. IEEE Trans. Knowl. Data Eng. 5 (6) (1993)
Adegbeniga Ola, Gultekin Özsoyoglu
Incomplete Relational Database Models Based on Intervals. IEEE Trans. Knowl. Data Eng. 5 (2) (1993)
Kumar V. Vadaparty, Y. Alp Aslandogan, Gultekin Özsoyoglu
Towards a Unified Visual Database Access. SIGMOD Conference (1993)
Gultekin Özsoyoglu, JiYoung Chung, Tzong-An Su
Information loss in three cell-level control techniques for summary tables. Inf. Sci. 70 (3) (1993)
Hsiu-Hsen Yao, Gultekin Özsoyoglu
Irreversibility problem in NL-class relations. Inf. Sci. 73 (3) (1993)
Gultekin Özsoyoglu, W. A. Abdul-Qader
Human factors study of two screen-oriented query languages: STBE and QBE. Inf. Softw. Technol. 34 (1) (1992)
Gultekin Özsoyoglu, Kaizheng Du, Sujatha Guru Swamy, Wen-Chi Hou
Processing Real-Time, Non-Aggregate Queries with Time-Constraints in CASE-DB. ICDE (1992)

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Publication Activity (10 Years)

Top Topics

Top Venues

Gultekin Özsoyoglu