Fred P. Davis

Publication Activity (10 Years)

Years Active: 2004-2010
Publications (10 Years): 0

Publications

Fred P. Davis, Andrej Sali
The Overlap of Small Molecule and Protein Binding Sites within Families of Protein Structures. PLoS Comput. Biol. 6 (2) (2010)
Ursula Pieper, Narayanan Eswar, Ben M. Webb, David Eramian, Libusha Kelly, David T. Barkan, Hannah Carter, Parminder Mankoo, Rachel Karchin, Marc A. Martí-Renom, Fred P. Davis, Andrej Sali
MODBASE, a database of annotated comparative protein structure models and associated resources. Nucleic Acids Res. 37 (Database-Issue) (2009)
Fred P. Davis, Sean R. Eddy
A tool for identification of genes expressed in patterns of interest using the Allen Brain Atlas. Bioinform. 25 (13) (2009)
Marc A. Martí-Renom, Andrea Rossi, Fátima Al-Shahrour, Fred P. Davis, Ursula Pieper, Joaquín Dopazo, Andrej Sali
The AnnoLite and AnnoLyze programs for comparative annotation of protein structures. BMC Bioinform. 8 (S-4) (2007)
Marc A. Martí-Renom, Ursula Pieper, Mallur S. Madhusudhan, Andrea Rossi, Narayanan Eswar, Fred P. Davis, Fátima Al-Shahrour, Joaquín Dopazo, Andrej Sali
DBAli tools: mining the protein structure space. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Ursula Pieper, Narayanan Eswar, Fred P. Davis, Hannes Braberg, Mallur S. Madhusudhan, Andrea Rossi, Marc A. Martí-Renom, Rachel Karchin, Ben M. Webb, David Eramian, Min-Yi Shen, Libusha Kelly, Francisco Melo, Andrej Sali
MODBASE: a database of annotated comparative protein structure models and associated resources. Nucleic Acids Res. 34 (Database-Issue) (2006)
Dmitry Korkin, Fred P. Davis, Frank Alber, Tinh Luong, Min-Yi Shen, Vladan Lucic, Mary B. Kennedy, Andrej Sali
Structural Modeling of Protein Interactions by Analogy: Application to PSD-95. PLoS Comput. Biol. 2 (11) (2006)
Fred P. Davis, Andrej Sali
PIBASE: a comprehensive database of structurally defined protein interfaces. Bioinform. 21 (9) (2005)
Ursula Pieper, Narayanan Eswar, Hannes Braberg, Mallur S. Madhusudhan, Fred P. Davis, Ashley C. Stuart, Nebojsa Mirkovic, Andrea Rossi, Marc A. Martí-Renom, András Fiser, Ben M. Webb, Daniel M. Greenblatt, Conrad C. Huang, Thomas E. Ferrin, Andrej Sali
MODBASE, a database of annotated comparative protein structure models, and associated resources. Nucleic Acids Res. 32 (Database-Issue) (2004)