Florence Tama

Publication Activity (10 Years)

Years Active: 2004-2023
Publications (10 Years): 8

Top Topics

Structural Properties

Electron Microscopy

Elastic Image Registration

Top Venues

J. Chem. Inf. Model.

Publications

Georgia Channing, Ria Patel, Paula Olaya, Ariel Keller Rorabaugh, Osamu Miyashita, Silvina Caíno-Lores, Catherine D. Schuman, Florence Tama, Michela Taufer
Composable Workflow for Accelerating Neural Architecture Search Using In Situ Analytics for Protein Classification. ICPP (2023)
Paula Olaya, Silvina Caíno-Lores, Vanessa Lama, Ria Patel, Ariel Keller Rorabaugh, Osamu Miyashita, Florence Tama, Michela Taufer
Identifying Structural Properties of Proteins from X-ray Free Electron Laser Diffraction Patterns. e-Science (2022)
Ria Patel, Ariel Keller Rorabaugh, Paula Olaya, Silvina Caíno-Lores, Georgia Channing, Catherine D. Schuman, Osamu Miyashita, Florence Tama, Michela Taufer
A Methodology to Generate Efficient Neural Networks for Classification of Scientific Datasets. e-Science (2022)
Sandhya P. Tiwari, Florence Tama, Osamu Miyashita
Protocol for Retrieving Three-Dimensional Biological Shapes for a Few XFEL Single-Particle Diffraction Patterns. J. Chem. Inf. Model. 61 (8) (2021)
Sandhya P. Tiwari, Sahil Chhabra, Florence Tama, Osamu Miyashita
Computational Protocol for Assessing the Optimal Pixel Size to Improve the Accuracy of Single-particle Cryo-electron Microscopy Maps. J. Chem. Inf. Model. 60 (5) (2020)
Sandhya P. Tiwari, Florence Tama, Osamu Miyashita
Searching for 3D structural models from a library of biological shapes using a few 2D experimental images. BMC Bioinform. 19 (1) (2018)
Qiyu Jin, Osamu Miyashita, Florence Tama, Jie Yang, Slavica Jonic
Poisson image denoising by piecewise principal component analysis and its application in single-particle X-ray diffraction imaging. IET Image Process. 12 (12) (2018)
Osamu Miyashita, Chigusa Kobayashi, Takaharu Mori, Yuji Sugita, Florence Tama
Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations. J. Comput. Chem. 38 (16) (2017)
Qiyu Jin, Carlos Oscar Sánchez Sorzano, Isabelle Callebaut, Florence Tama, Slavica Jonic
Elastic image registration to fully explore macromolecular dynamics by electron microscopy. ICIP (2014)
Rubén Nogales-Cadenas, Slavica Jonic, Florence Tama, A. A. Arteni, Daniel Tabas-Madrid, Miguel Vázquez, Alberto D. Pascual-Montano, Carlos Oscar Sánchez Sorzano
3DEM Loupe: analysis of macromolecular dynamics using structures from electron microscopy. Nucleic Acids Res. 41 (Webserver-Issue) (2013)
Joseph L. Baker, Nicolas Biais, Florence Tama
Steered Molecular Dynamics Simulations of a Type IV Pilus Probe Initial Stages of a Force-Induced Conformational Transition. PLoS Comput. Biol. 9 (4) (2013)
Willy Wriggers, Pablo Chacón, Julio A. Kovacs, Florence Tama, Stefan Birmanns
Topology representing neural networks reconcile biomolecular shape, structure, and dynamics. Neurocomputing 56 (2004)