Daniel Doerr

Publication Activity (10 Years)

Years Active: 2011-2023
Publications (10 Years): 17

Top Topics

Gene Expression Data

Similarity Measure

Escherichia Coli

Top Venues

Algorithms Mol. Biol.

J. Comput. Biol.

Publications

Daniel Doerr, Bernard M. E. Moret
Fast computation of approximate weak common intervals in multiple indeterminate strings. CoRR (2023)
Helmuth O. M. Silva, Diego P. Rubert, Eloi Araujo, Eckhard Steffen, Daniel Doerr, Fábio Viduani Martinez
Algorithms for the genome median under a restricted measure of rearrangement. RAIRO Oper. Res. 57 (3) (2023)
Konstantinn Bonnet, Tobias Marschall, Daniel Doerr
Correction: Constructing founder sets under allelic and non-allelic homologous recombination. Algorithms Mol. Biol. 18 (1) (2023)
Konstantinn Bonnet, Tobias Marschall, Daniel Doerr
Constructing founder sets under allelic and non-allelic homologous recombination. Algorithms Mol. Biol. 18 (1) (2023)
Konstantinn Bonnet, Tobias Marschall, Daniel Doerr
Constructing Founder Sets Under Allelic and Non-Allelic Homologous Recombination. WABI (2022)
Diego P. Rubert, Daniel Doerr, Marília D. V. Braga
The potential of family-free rearrangements towards gene orthology inference. J. Bioinform. Comput. Biol. 19 (6) (2021)
Leonard Bohnenkämper, Marília D. V. Braga, Daniel Doerr, Jens Stoye
Computing the Rearrangement Distance of Natural Genomes. J. Comput. Biol. 28 (4) (2021)
Daniel Doerr, Cédric Chauve
Small Parsimony for Natural Genomes in the DCJ-Indel Model. CoRR (2021)
Daniel Doerr, Cédric Chauve
Small parsimony for natural genomes in the DCJ-indel model. J. Bioinform. Comput. Biol. 19 (6) (2021)
Leonard Bohnenkämper, Marília D. V. Braga, Daniel Doerr, Jens Stoye
Computing the rearrangement distance of natural genomes. CoRR (2020)
Leonard Bohnenkämper, Marília D. V. Braga, Daniel Doerr, Jens Stoye
Computing the Rearrangement Distance of Natural Genomes. RECOMB (2020)
Tizian Schulz, Jens Stoye, Daniel Doerr
Finding Teams in Graphs and Its Application to Spatial Gene Cluster Discovery. RECOMB-CG (2017)
Daniel Doerr, Luis Antonio Brasil Kowada, Eloi Araujo, Shachi Deshpande, Simone Dantas, Bernard M. E. Moret, Jens Stoye
New Genome Similarity Measures based on Conserved Gene Adjacencies. J. Comput. Biol. 24 (6) (2017)
Daniel Doerr, Metin Balaban, Pedro Feijão, Cédric Chauve
The gene family-free median of three. Algorithms Mol. Biol. 12 (1) (2017)
Daniel Doerr, Pedro Feijão, Metin Balaban, Cédric Chauve
The gene family-free median of three. CoRR (2016)
Luis Antonio Brasil Kowada, Daniel Doerr, Simone Dantas, Jens Stoye
New Genome Similarity Measures Based on Conserved Gene Adjacencies. RECOMB (2016)
Daniel Doerr, Pedro Feijão, Metin Balaban, Cédric Chauve
The Gene Family-Free Median of Three. WABI (2016)
Daniel Doerr, Kun Hu, Sondra R. Renly, Stefan Edlund, Matthew A. Davis, James H. Kaufman, Justin Lessler, Matthias Filter, Annemarie Käsbohrer, Bernd Appel
Accelerating investigation of food-borne disease outbreaks using pro-active geospatial modeling of food supply chains. HealthGIS (2012)
Daniel Doerr, Ilan Gronau, Shlomo Moran, Irad Yavneh
Stochastic errors vs. modeling errors in distance based phylogenetic reconstructions. Algorithms Mol. Biol. 7 (2012)
Daniel Doerr, Annelyse Thévenin, Jens Stoye
Gene family assignment-free comparative genomics. BMC Bioinform. 13 (S-19) (2012)
Daniel Doerr, Ilan Gronau, Shlomo Moran, Irad Yavneh
Stochastic Errors vs. Modeling Errors in Distance Based Phylogenetic Reconstructions - (Extended Abstract). WABI (2011)