Daniel C. Zielinski

Publication Activity (10 Years)

Years Active: 2012-2024
Publications (10 Years): 3

Top Topics

Statistical Models

Biochemical Networks

Multiple Task Learning

Top Venues

PLoS Comput. Biol.

BMC Syst. Biol.

University of California, San Diego, USA (PHD)

Education History

University of California, San Diego, USA

PHD

Publications

Sizhe Qiu, Xinlong Wan, Yueshan Liang, Cameron R. Lamoureux, Amir Akbari, Bernhard O. Palsson, Daniel C. Zielinski
Inferred regulons are consistent with regulator binding sequences in E. coli. PLoS Comput. Biol. 20 (1) (2024)
Zachary B. Haiman, Daniel C. Zielinski, Yuko Koike, James T. Yurkovich, Bernhard O. Palsson
MASSpy: Building, simulating, and visualizing dynamic biological models in Python using mass action kinetics. PLoS Comput. Biol. 17 (1) (2021)
Bin Du, Daniel C. Zielinski, Erol S. Kavvas, Andreas Dräger, Justin Tan, Zhen Zhang, Kayla E. Ruggiero, Garri A. Arzumanyan, Bernhard O. Palsson
Evaluation of rate law approximations in bottom-up kinetic models of metabolism. BMC Syst. Biol. 10 (2016)
Andreas Dräger, Daniel C. Zielinski, Roland Keller, Matthias Rall, Johannes Eichner, Bernhard O. Palsson, Andreas Zell
SBMLsqueezer 2: context-sensitive creation of kinetic equations in biochemical networks. BMC Syst. Biol. 9 (2015)
Hojung Nam, Miguel Campodonico, Aarash Bordbar, Daniel R. Hyduke, Sangwoo Kim, Daniel C. Zielinski, Bernhard O. Palsson
A Systems Approach to Predict Oncometabolites via Context-Specific Genome-Scale Metabolic Networks. PLoS Comput. Biol. 10 (9) (2014)
Jan Schellenberger, Daniel C. Zielinski, Wing Choi, Sunthosh Madireddi, Vasiliy Portnoy, David A. Scott, Jennifer L. Reed, Andrei Osterman, Bernhard Ø. Palsson
C isotope tracing experiments using Monte Carlo sampling. BMC Syst. Biol. 6 (2012)