Can Kesmir

Publication Activity (10 Years)

Years Active: 2007-2020
Publications (10 Years): 2

Top Topics

Frequent Sequences

Live Cell Imaging

Top Venues

PLoS Comput. Biol.

Nucleic Acids Res.

Publications

Dmitry V. Bagaev, Renske M. A. Vroomans, Jerome Samir, Ulrik Stervbo, Cristina Rius, Garry Dolton, Alexander Greenshields-Watson, Meriem Attaf, Evgeny S. Egorov, Ivan V. Zvyagin, Nina Babel, David K. Cole, Andrew J. Godkin, Andrew K. Sewell, Can Kesmir, Dmitry M. Chudakov, Fabio Luciani, Mikhail Shugay
VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium. Nucleic Acids Res. 48 (Database-Issue) (2020)
Mikhail Shugay, Dmitriy V. Bagaev, Ivan V. Zvyagin, Renske M. A. Vroomans, Jeremy Chase Crawford, Garry Dolton, Ekaterina Komech, Anastasiya L. Sycheva, Anna E. Koneva, Evgeniy S. Egorov, Alexey V. Eliseev, Ewald van Dyk, Pradyot Dash, Meriem Attaf, Cristina Rius, Kristin Ladell, James E. McLaren, Katherine K. Matthews, E. Bridie Clemens, Daniel C. Douek, Fabio Luciani, Debbie van Baarle, Katherine Kedzierska, Can Kesmir, Paul G. Thomas, David A. Price, Andrew K. Sewell, Dmitry M. Chudakov
VDJdb: a curated database of T-cell receptor sequences with known antigen specificity. Nucleic Acids Res. 46 (Database-Issue) (2018)
Jorg J. A. Calis, Matt Maybeno, Jason A. Greenbaum, Daniela Weiskopf, Aruna D. De Silva, Alessandro Sette, Can Kesmir, Björn Peters
Properties of MHC Class I Presented Peptides That Enhance Immunogenicity. PLoS Comput. Biol. 9 (10) (2013)
Paola Carrillo-Bustamante, Can Kesmir, Rob J. De Boer
Virus Encoded MHC-Like Decoys Diversify the Inhibitory KIR Repertoire. PLoS Comput. Biol. 9 (10) (2013)
Rafal Mostowy, Roger D. Kouyos, Ilka Hoof, Trevor Hinkley, Mojgan Haddad, Jeannette M. Whitcomb, Christos J. Petropoulos, Can Kesmir, Sebastian Bonhoeffer
Estimating the Fitness Cost of Escape from HLA Presentation in HIV-1 Protease and Reverse Transcriptase. PLoS Comput. Biol. 8 (5) (2012)
Ilka Hoof, Debbie van Baarle, William H. Hildebrand, Can Kesmir
Proteome Sampling by the HLA Class I Antigen Processing Pathway. PLoS Comput. Biol. 8 (5) (2012)
Jorg J. A. Calis, Rob J. De Boer, Can Kesmir
Degenerate T-cell Recognition of Peptides on MHC Molecules Creates Large Holes in the T-cell Repertoire. PLoS Comput. Biol. 8 (3) (2012)
Claus Lundegaard, Ole Lund, Can Kesmir, Søren Brunak, Morten Nielsen
Modeling the adaptive immune system: predictions and simulations. Bioinform. 23 (24) (2007)