C. Victor Jongeneel

Publication Activity (10 Years)

Years Active: 1999-2021
Publications (10 Years): 4

Top Topics

Sequence Analysis

Computing Environments

Top Venues

PLoS Comput. Biol.

J. Am. Medical Informatics Assoc.

Publications

Shaun Aron, C. Victor Jongeneel, Paballo Abel Chauke, Melek Chaouch, Judit Kumuthini, Lyndon Zass, Fouzia Radouani, Samar Kamal Kassim, Faisal M. Fadlelmola, Nicola J. Mulder
Ten simple rules for developing bioinformatics capacity at an academic institution. PLoS Comput. Biol. 17 (12) (2021)
Shakuntala Baichoo, Yassine Souilmi, Sumir Panji, Gerrit Botha, Ayton Meintjes, Scott Hazelhurst, Hocine Bendou, Eugene de Beste, Phelelani T. Mpangase, Oussema Souiai, Mustafa Alghali, Long Yi, Brian D. O'Connor, Michael R. Crusoe, Don Armstrong, Shaun Aron, Fourie Joubert, Azza E. Ahmed, Mamana Mbiyavanga, Peter van Heusden, Lerato E. Magosi, Jennie Zermeno, Liudmila S. Mainzer, Faisal M. Fadlelmola, C. Victor Jongeneel, Nicola J. Mulder
Developing reproducible bioinformatics analysis workflows for heterogeneous computing environments to support African genomics. BMC Bioinform. 19 (1) (2018)
C. Victor Jongeneel, Ovokeraye Achinike-Oduaran, Ezekiel F. Adebiyi, Marion O. Adebiyi, Seun Adeyemi, Bola Akanle, Shaun Aron, Efejiro Ashano, Hocine Bendou, Gerrit Botha, Emile R. Chimusa, Ananyo Choudhury, Ravikiran Donthu, Jenny Drnevich, Oluwadamila Falola, Christopher J. Fields, Scott Hazelhurst, Liesl Hendry, Itunuoluwa Isewon, Radhika S. Khetani, Judit Kumuthini, Magambo Phillip Kimuda, Lerato E. Magosi, Liudmila S. Mainzer, Suresh Maslamoney, Mamana Mbiyavanga, Ayton Meintjes, Danny Mugutso, Phelelani T. Mpangase, Richard Munthali, Victoria Nembaware, Andrew Ndhlovu, Trust Odia, Adaobi Okafor, Olaleye Oladipo, Sumir Panji, Venesa Pillay, Gloria Rendon, Dhriti Sengupta, Nicola J. Mulder
Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network. PLoS Comput. Biol. 13 (6) (2017)
Subho S. Banerjee, Arjun P. Athreya, Liudmila S. Mainzer, C. Victor Jongeneel, Wen-mei W. Hwu, Zbigniew T. Kalbarczyk, Ravishankar K. Iyer
Efficient and Scalable Workflows for Genomic Analyses. DIDC@HPDC (2016)
Saurabh Sinha, Jun Song, Richard M. Weinshilboum, C. Victor Jongeneel, Jiawei Han
KnowEnG: a knowledge engine for genomics. J. Am. Medical Informatics Assoc. 22 (6) (2015)
Robin Liechti, Gábor Csárdi, Sven Bergmann, Frédéric Schütz, Thierry Sengstag, Sylvia F. Boj, Joan-Marc Servitja, Jorge Ferrer, Leentje Van Lommel, Frans Schuit, Sonia Klinger, Bernard Thorens, Najib Naamane, Decio L. Eizirik, Lorella Marselli, Marco Bugliani, Piero Marchetti, Stephanie Lucas, Cecilia Holm, C. Victor Jongeneel, Ioannis Xenarios
EuroDia: a beta-cell gene expression resource. Database J. Biol. Databases Curation 2010 (2010)
Sébastien Moretti, Fabrice Armougom, Iain M. Wallace, Desmond G. Higgins, C. Victor Jongeneel, Cédric Notredame
The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Marco Pagni, Vassilios Ioannidis, Lorenzo Cerutti, Monique Zahn-Zabal, C. Victor Jongeneel, Jörg Hau, Olivier Martin, Dmitri Kuznetsov, Laurent Falquet
MyHits: improvements to an interactive resource for analyzing protein sequences. Nucleic Acids Res. 35 (Web-Server-Issue) (2007)
Florence Armand, Philipp Bucher, C. Victor Jongeneel, Edward E. Farmer
Rapid and selective surveillance of Arabidopsis thaliana genome annotations with Centrifuge. Bioinform. 21 (12) (2005)
Marco Pagni, Vassilios Ioannidis, Lorenzo Cerutti, Monique Zahn-Zabal, C. Victor Jongeneel, Laurent Falquet
MyHits: a new interactive resource for protein annotation and domain identification. Nucleic Acids Res. 32 (Web-Server-Issue) (2004)
Peter Sperisen, Christian Iseli, Marco Pagni, Brian J. Stevenson, Philipp Bucher, C. Victor Jongeneel
trome, trEST and trGEN: databases of predicted protein sequences. Nucleic Acids Res. 32 (Database-Issue) (2004)
Claudio Lottaz, Christian Iseli, C. Victor Jongeneel, Philipp Bucher
Modeling sequencing errors by combining Hidden Markov models. ECCB (2003)
Laurent Falquet, Lorenza Bordoli, Vassilios Ioannidis, Marco Pagni, C. Victor Jongeneel
Swiss EMBnet node web server. Nucleic Acids Res. 31 (13) (2003)
Marco Pagni, Christian Iseli, Thomas Junier, Laurent Falquet, C. Victor Jongeneel, Philipp Bucher
trEST, trGEN and Hits: access to databases of predicted protein sequences. Nucleic Acids Res. 29 (1) (2001)
Marco Pagni, C. Victor Jongeneel
Making Sense of Score Statistics for Sequence Alignments. Briefings Bioinform. 2 (1) (2001)
C. Victor Jongeneel
Searching the Expressed Sequence Tag (EST) Databases: Panning for Genes. Briefings Bioinform. 1 (1) (2000)
C. Victor Jongeneel
The need for a human gene index. Bioinform. 16 (12) (2000)
Christian Iseli, C. Victor Jongeneel, Philipp Bucher
ESTScan: A Program for Detecting, Evaluating, and Reconstructing Potential Coding Regions in EST Sequences. ISMB (1999)