Brian Jiménez-García

Publication Activity (10 Years)

Years Active: 2013-2023
Publications (10 Years): 11

Top Topics

Protein Complexes

Computational Methods

Top Venues

Nucleic Acids Res.

J. Chem. Inf. Model.

Publications

Brian Jiménez-García, Jorge Roel-Touris, Didier Barradas-Bautista
The LightDock Server: Artificial Intelligence-powered modeling of macromolecular interactions. Nucleic Acids Res. 51 (W1) (2023)
Cyprien Plateau-Holleville, Simon Guionnière, Benjamin Boyer, Brian Jiménez-García, Guillaume Levieux, Stéphane Mérillou, Maxime Maria, Matthieu Montès
: interactive real-time multi-body protein-protein docking software. Bioinform. 39 (10) (2023)
Gilberto Pereira, Brian Jiménez-García, Riccardo Pellarin, Guillaume Launay, Sangwook Wu, Juliette Martin, Paulo Cesar Telles de Souza
Rational Prediction of PROTAC-Compatible Protein-Protein Interfaces by Molecular Docking. J. Chem. Inf. Model. 63 (21) (2023)
Rodrigo Vargas Honorato, Panagiotis I. Koukos, Brian Jiménez-García, Andrei Tsaregorodtsev, Marco Verlato, Andrea Giachetti, Antonio Rosato, Alexandre M. J. J. Bonvin
Structural biology in the clouds: The WeNMR-EOSC Ecosystem. CoRR (2021)
Miguel Romero-Durana, Brian Jiménez-García, Juan Fernández-Recio
pyDockEneRes: per-residue decomposition of protein-protein docking energy. Bioinform. 36 (7) (2020)
Francesco Ambrosetti, Tobias Hegelund Olsen, Pier Paolo Olimpieri, Brian Jiménez-García, Edoardo Milanetti, Paolo Marcatili, Alexandre M. J. J. Bonvin
proABC-2: PRediction of AntiBody contacts v2 and its application to information-driven docking. Bioinform. 36 (20) (2020)
Jorge Roel-Touris, Alexandre M. J. J. Bonvin, Brian Jiménez-García
LightDock goes information-driven. Bioinform. 36 (3) (2020)
Brian Jiménez-García, Katarina Elez, Panagiotis I. Koukos, Alexandre M. J. J. Bonvin, Anna Vangone
PRODIGY-crystal: a web-tool for classification of biological interfaces in protein complexes. Bioinform. 35 (22) (2019)
Justina Jankauskaite, Brian Jiménez-García, Justas Dapkunas, Juan Fernández-Recio, Iain H. Moal
SKEMPI 2.0: an updated benchmark of changes in protein-protein binding energy, kinetics and thermodynamics upon mutation. Bioinform. 35 (3) (2019)
Brian Jiménez-García, Jorge Roel-Touris, Miguel Romero-Durana, Miquel Vidal, Daniel Jiménez-González, Juan Fernández-Recio
LightDock: a new multi-scale approach to protein-protein docking. Bioinform. 34 (1) (2018)
Iain H. Moal, Didier Barradas-Bautista, Brian Jiménez-García, Mieczyslaw Torchala, Arjan van der Velde, Thom Vreven, Zhiping Weng, Paul A. Bates, Juan Fernández-Recio
IRaPPA: information retrieval based integration of biophysical models for protein assembly selection. Bioinform. 33 (12) (2017)
Iain H. Moal, Brian Jiménez-García, Juan Fernández-Recio
CCharPPI web server: computational characterization of protein-protein interactions from structure. Bioinform. 31 (1) (2015)
Brian Jiménez-García, Carles Pons, Dmitri I. Svergun, Pau Bernadó, Juan Fernández-Recio
pyDockSAXS: protein-protein complex structure by SAXS and computational docking. Nucleic Acids Res. 43 (Webserver-Issue) (2015)
Brian Jiménez-García, Carles Pons, Juan Fernández-Recio
pyDockWEB: a web server for rigid-body protein-protein docking using electrostatics and desolvation scoring. Bioinform. 29 (13) (2013)