Anna Vangone

Publication Activity (10 Years)

Years Active: 2011-2021
Publications (10 Years): 6

Top Topics

Protein Complexes

Molecular Dynamics

Top Venues

J. Comput. Aided Mol. Des.

Publications

Dominik Schwarz, Guy Georges, Sebastian Kelm, Jiye Shi, Anna Vangone, Charlotte M. Deane
Co-evolutionary distance predictions contain flexibility information. Bioinform. 38 (1) (2021)
Brian Jiménez-García, Katarina Elez, Panagiotis I. Koukos, Alexandre M. J. J. Bonvin, Anna Vangone
PRODIGY-crystal: a web-tool for classification of biological interfaces in protein complexes. Bioinform. 35 (22) (2019)
Anna Vangone, Jörg Schaarschmidt, Panagiotis I. Koukos, Cunliang Geng, Nevia Citro, Mikael E. Trellet, Li C. Xue, Alexandre M. J. J. Bonvin
Large-scale prediction of binding affinity in protein-small ligand complexes: the PRODIGY-LIG web server. Bioinform. 35 (9) (2019)
Zeynep Kurkcuoglu, Panagiotis I. Koukos, Nevia Citro, Mikael E. Trellet, João P. G. L. M. Rodrigues, Irina S. Moreira, Jorge Roel-Touris, Adrien S. J. Melquiond, Cunliang Geng, Jörg Schaarschmidt, Li C. Xue, Anna Vangone, Alexandre M. J. J. Bonvin
Performance of HADDOCK and a simple contact-based protein-ligand binding affinity predictor in the D3R Grand Challenge 2. J. Comput. Aided Mol. Des. 32 (1) (2018)
Li C. Xue, João P. G. L. M. Rodrigues, Panagiotis L. Kastritis, Alexandre M. J. J. Bonvin, Anna Vangone
PRODIGY: a web server for predicting the binding affinity of protein-protein complexes. Bioinform. 32 (23) (2016)
Edrisse Chermak, Andrea Petta, Luigi Serra, Anna Vangone, Vittorio Scarano, Luigi Cavallo, Romina Oliva
CONSRANK: a server for the analysis, comparison and ranking of docking models based on inter-residue contacts. Bioinform. 31 (9) (2015)
Safwat Abdel-Azeim, Edrisse Chermak, Anna Vangone, Romina Oliva, Luigi Cavallo
MDcons: Intermolecular contact maps as a tool to analyze the interface of protein complexes from molecular dynamics trajectories. BMC Bioinform. 15 (S-5) (2014)
Anna Vangone, Romina Oliva, Luigi Cavallo
CONS-COCOMAPS: a novel tool to measure and visualize the conservation of inter-residue contacts in multiple docking solutions. BMC Bioinform. 13 (S-4) (2012)
Anna Vangone, Raffaele Spinelli, Vittorio Scarano, Luigi Cavallo, Romina Oliva
COCOMAPS: a web application to analyze and visualize contacts at the interface of biomolecular complexes. Bioinform. 27 (20) (2011)