Andrew W. McPherson

Publication Activity (10 Years)

Years Active: 2009-2018
Publications (10 Years): 1

Top Topics

Electro Mechanical Systems

High Throughput Sequencing

Entity Resolution

Joint Inference

Top Venues

Publications

Yen-Yi Lin, Alexander Gawronski, Faraz Hach, Sujun Li, Ibrahim Numanagic, Iman Sarrafi, Swati Mishra, Andrew W. McPherson, Colin C. Collins, Milan Radovich, Haixu Tang, Süleyman Cenk Sahinalp
Computational identification of micro-structural variations and their proteogenomic consequences in cancer. Bioinform. 34 (10) (2018)
Andrew W. McPherson, Andrew Roth, Gavin Ha, Sohrab P. Shah, Cédric Chauve, Süleyman Cenk Sahinalp
Joint Inference of Genome Structure and Content in Heterogeneous Tumour Samples. CoRR (2015)
Andrew W. McPherson, Andrew Roth, Cédric Chauve, Süleyman Cenk Sahinalp
Joint Inference of Genome Structure and Content in Heterogeneous Tumor Samples. RECOMB (2015)
Salem Malikic, Andrew W. McPherson, Nilgun Donmez, Cenk S. Sahinalp
Clonality inference in multiple tumor samples using phylogeny. Bioinform. 31 (9) (2015)
Andrew W. McPherson, Chunxiao Wu, Alexander Wyatt, Sohrab P. Shah, Colin C. Collins, Süleyman Cenk Sahinalp
Discovery of Complex Genomic Rearrangements in Cancer Using High-Throughput Sequencing. RECOMB (2012)
Fereydoun Hormozdiari, Iman Hajirasouliha, Andrew W. McPherson, Evan E. Eichler, Süleyman Cenk Sahinalp
Simultaneous Structural Variation Discovery in Multiple Paired-End Sequenced Genomes. RECOMB (2011)
Andrew W. McPherson, Chunxiao Wu, Iman Hajirasouliha, Fereydoun Hormozdiari, Faraz Hach, Anna Lapuk, Stanislav Volik, Sohrab P. Shah, Colin C. Collins, Süleyman Cenk Sahinalp
Comrad: detection of expressed rearrangements by integrated analysis of RNA-Seq and low coverage genome sequence data. Bioinform. 27 (11) (2011)
Andrew W. McPherson, Fereydoun Hormozdiari, Abdalnasser Zayed, Ryan Giuliany, Gavin Ha, Mark G. F. Sun, Malachi Griffith, Alireza Heravi Moussavi, Janine Senz, Nataliya Melnyk, Marina Pacheco, Marco A. Marra, Martin Hirst, Torsten O. Nielsen, Süleyman Cenk Sahinalp, David G. Huntsman, Sohrab P. Shah
deFuse: An Algorithm for Gene Fusion Discovery in Tumor RNA-Seq Data. PLoS Comput. Biol. 7 (5) (2011)
Aïda Ouangraoua, Frédéric Boyer, Andrew W. McPherson, Eric Tannier, Cédric Chauve
Prediction of Contiguous Regions in the Amniote Ancestral Genome. ISBRA (2009)