Alfonso Urso

Publication Activity (10 Years)

Years Active: 2002-2023
Publications (10 Years): 22

Top Topics

Genomic Sequences

Top Venues

Publications

Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Salvatore Gaglio, Alfonso Urso
GOWDL: gene ontology-driven wide and deep learning model for cell typing of scRNA-seq data. Briefings Bioinform. 24 (6) (2023)
Gianmarco Coppola, Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Alfonso Urso, Salvatore Gaglio
A Gene Ontology-Driven Wide and Deep Learning Architecture for Cell-Type Classification from Single-Cell RNA-seq Data. EANN (2022)
Alfonso Urso, Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Giosuè Lo Bosco, Riccardo Rizzo
BITS2019: the sixteenth annual meeting of the Italian society of bioinformatics. BMC Bioinform. (8) (2020)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
: extending miRTissue web service with the analysis of ceRNA-ceRNA interactions. BMC Bioinform. (8) (2020)
Valeria Boscaino, Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
MiRNA therapeutics based on logic circuits of biological pathways. BMC Bioinform. (9) (2019)
Paolo Romano, Arnaud Céol, Andreas Dräger, Antonino Fiannaca, Rosalba Giugno, Massimo La Rosa, Luciano Milanesi, Ulrich Pfeffer, Riccardo Rizzo, Soo-Yong Shin, Junfeng Xia, Alfonso Urso
The 2017 Network Tools and Applications in Biology (NETTAB) workshop: aims, topics and outcomes. BMC Bioinform. (4) (2019)
Giosuè Lo Bosco, Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
Variable Ranking Feature Selection for the Identification of Nucleosome Related Sequences. ADBIS (Short Papers and Workshops) (2018)
Antonio Messina, Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Alfonso Urso
BioGraph: a web application and a graph database for querying and analyzing bioinformatics resources. BMC Syst. Biol. 12 (5) (2018)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Giosuè Lo Bosco, Giovanni Renda, Riccardo Rizzo, Salvatore Gaglio, Alfonso Urso
Deep learning models for bacteria taxonomic classification of metagenomic data. BMC Bioinform. (7) (2018)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Giosuè Lo Bosco, Riccardo Rizzo, Alfonso Urso
Identification of Key miRNAs in Regulation of PPI Networks. CIBB (2018)
Antonio Messina, Haikal Pribadi, Jo Stichbury, Michelangelo Bucci, Szymon Klarman, Alfonso Urso
BioGrakn: A Knowledge Graph-Based Semantic Database for Biomedical Sciences. CISIS (2017)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Antonio Messina, Riccardo Rizzo, Dario Stabile, Alfonso Urso
Gremlin Language for Querying the BiographDB Integrated Biological Database. IWBBIO (1) (2017)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
nRC: non-coding RNA Classifier based on structural features. BioData Min. 10 (1) (2017)
Gustavo C. Martins, Alfonso Urso, André Mansano, Yao Liu, Wouter A. Serdijn
Energy-Efficient Low-Power Circuits for Wireless Energy and Data Transfer in IoT Sensor Nodes. CoRR (2017)
Giosuè Lo Bosco, Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
A Deep Learning Model for Epigenomic Studies. SITIS (2016)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Antonio Messina, Riccardo Rizzo, Alfonso Urso
A Problem-Driven Approach for Building a Bioinformatics GraphDB. CIBB (2016)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
MiRNATIP: a SOM-based miRNA-target interactions predictor. BMC Bioinform. 17 (S-11) (2016)
Antonino Fiannaca, Laura La Paglia, Massimo La Rosa, Antonio Messina, Pietro Storniolo, Alfonso Urso
Integrated DB for Bioinformatics: A Case Study on Analysis of Functional Effect of MiRNA SNPs in Cancer. ITBAM (2016)
Antonio Messina, Pietro Storniolo, Alfonso Urso
Keep It Simple, Fast and Scalable: A Multi-model NoSQL DBMS as an (eb) XML-over-SOAP Service. AINA Workshops (2016)
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
Classification Experiments of DNA Sequences by Using a Deep Neural Network and Chaos Game Representation. CompSysTech (2016)
Antonio Messina, Pietro Storniolo, Alfonso Urso
EXPO: A Modern NoSQL-based ebXML Registry for Health Information Systems. CompSysTech (2016)
Antonio Messina, Riccardo Rizzo, Pietro Storniolo, Mario Tripiciano, Alfonso Urso
The Database-is-the-Service Pattern for Microservice Architectures. ITBAM (2016)
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
A Deep Learning Approach to DNA Sequence Classification. CIBB (2015)
Antonino Fiannaca, Massimo La Rosa, Laura La Paglia, Riccardo Rizzo, Alfonso Urso
Analysis of miRNA expression profiles in breast cancer using biclustering. BMC Bioinform. 16 (S-4) (2015)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
Probabilistic topic modeling for the analysis and classification of genomic sequences. BMC Bioinform. 16 (S-6) (2015)
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
A k-mer-based barcode DNA classification methodology based on spectral representation and a neural gas network. Artif. Intell. Medicine 64 (3) (2015)
Riccardo Rizzo, Antonino Fiannaca, Massimo La Rosa, Alfonso Urso
The General Regression Neural Network to Classify Barcode and mini-barcode DNA. CIBB (2014)
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
An expert system hybrid architecture to support experiment management. Expert Syst. Appl. 41 (4) (2014)
Antonino Fiannaca, Massimo La Rosa, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
The BioDICE Taverna plugin for clustering and visualization of biological data: a workflow for molecular compounds exploration. J. Cheminformatics 6 (1) (2014)
Antonino Fiannaca, Massimo La Rosa, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
Knowledge organization for modelling workflows in Taverna environment. MED (2014)
Antonino Fiannaca, Massimo La Rosa, Alfonso Urso, Riccardo Rizzo, Salvatore Gaglio
A knowledge-based decision support system in bioinformatics: an application to protein complex extraction. BMC Bioinform. 14 (S-1) (2013)
Antonino Fiannaca, Giuseppe Di Fatta, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
Simulated annealing technique for fast learning of SOM networks. Neural Comput. Appl. 22 (5) (2013)
Antonino Fiannaca, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
Analysis of DNA Barcode Sequences Using Neural Gas and Spectral Representation. EANN (2) (2013)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
Genomic Sequence Classification Using Probabilistic Topic Modeling. CIBB (2013)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
Alignment-free analysis of barcode sequences by means of compression-based methods. BMC Bioinform. 14 (S-7) (2013)
Massimo La Rosa, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso
A Study of Compression-Based Methods for the Analysis of Barcode Sequences. CIBB (2012)
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
An Intelligent System for Building Bioinformatics Workflows. CISIS (2012)
Massimo La Rosa, Riccardo Rizzo, Alfonso Urso
Soft Topographic Maps for Clustering and Classifying Bacteria Using Housekeeping Genes. Adv. Artif. Neural Syst. 2011 (2011)
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Daniele Peri, Riccardo Rizzo, Alfonso Urso
A Knowledge Based Decision Support System for Bioinformatics and System Biology. CIBB (2010)
José Flich, Alfonso Urso, Ulrich Brüning, Giuseppe Di Fatta
High Performance Networks. Euro-Par (2) (2010)
Riccardo Rizzo, Alfonso Urso
Identifying Clusters Using Growing Neural Gas: First Results. ICANN (1) (2009)
Massimo La Rosa, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
Normalised compression distance and evolutionary distance of genomic sequences: comparison of clustering results. Int. J. Knowl. Eng. Soft Data Paradigms 1 (4) (2009)
Antonino Fiannaca, Salvatore Gaglio, Massimo La Rosa, Daniele Peri, Riccardo Rizzo, Alfonso Urso
A Proposed Knowledge Based Approach for Solving Proteomics Issues. CIBB (2009)
Antonino Fiannaca, Giuseppe Di Fatta, Alfonso Urso, Riccardo Rizzo, Salvatore Gaglio
A New Linear Initialization in SOM for Biomolecular Data. CIBB (2008)
Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
A New SOM Initialization Algorithm for Nonvectorial Data. KES (1) (2008)
Massimo La Rosa, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
Comparison of Genomic Sequences Clustering Using Normalized Compression Distance and Evolutionary Distance. KES (3) (2008)
Claudio Mirabello, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
Clustering Bacteria Species Using Neural Gas: Preliminary Study. CIBB (2008)
Antonino Fiannaca, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
Clustering Quality and Topology Preservation in Fast Learning SOMs. ICANN (1) (2008)
Massimo La Rosa, Giuseppe Di Fatta, Salvatore Gaglio, Giovanni M. Giammanco, Riccardo Rizzo, Alfonso Urso
Soft Topographic Map for Clustering and Classification of Bacteria. IDA (2007)
Giovanni Aiello, Marco Alessi, Massimo Cossentino, Pietro Storniolo, Alfonso Urso
DNK-WSD: A Distributed Approach for Knowledge Discovery in Peer to Peer Networks. PDP (2007)
Antonino Fiannaca, Giuseppe Di Fatta, Riccardo Rizzo, Alfonso Urso, Salvatore Gaglio
Fast Training of Self Organizing Maps for the Visual Exploration of Molecular Compounds. IJCNN (2007)
Antonino Fiannaca, Giuseppe Di Fatta, Salvatore Gaglio, Riccardo Rizzo, Alfonso Urso
Improved SOM Learning Using Simulated Annealing. ICANN (1) (2007)
Giuseppe Di Fatta, Antonino Fiannaca, Riccardo Rizzo, Alfonso Urso, Michael R. Berthold, Salvatore Gaglio
Context-Aware Visual Exploration of Molecular Datab. ICDM Workshops (2006)
Giovanni Aiello, Marco Alessi, Massimo Cossentino, Alfonso Urso, Giuseppe Vella
RTDWD: Real-Time Distributed Wideband-Delphi for User Stories Estimation. RISE (2006)
Salvatore Gaglio, Luca Gatani, Giuseppe Lo Re, Alfonso Urso
A Logical Architecture for Active Network Management. J. Netw. Syst. Manag. 14 (1) (2006)
Alessandra De Paola, S. Fiduccia, Salvatore Gaglio, Luca Gatani, Giuseppe Lo Re, A. Pizzitola, Marco Ortolani, Pietro Storniolo, Alfonso Urso
Rule Based Reasoning for Network Management. CAMP (2005)
Marco Ortolani, Luca Gatani, Giuseppe Lo Re, Alfonso Urso, Salvatore Gaglio
An efficient retransmission strategy for data gathering in wireless sensor networks. ETFA (2005)
Giovanni Aiello, Salvatore Gaglio, Giuseppe Lo Re, Pietro Storniolo, Alfonso Urso
The Random Neural Network Model for the On-Line Multicast Problem. WIRN (2004)
Giuseppe Lo Presti, Giuseppe Lo Re, Pietro Storniolo, Alfonso Urso
A Grid Enabled Parallel Hybrid Genetic Algorithm for SPN. International Conference on Computational Science (2004)
Salvatore Gaglio, Luca Gatani, Giuseppe Lo Re, Alfonso Urso
Exploiting deductive processes for automated network management. ICON (2004)
Salvatore Gaglio, Luca Gatani, Giuseppe Lo Presti, Giuseppe Lo Re, Alfonso Urso
A Dynamic Reasoning Architecture for Computer Network Management. ICTAI (2004)
Giuseppe Di Fatta, Giuseppe Lo Re, Alfonso Urso
Parallel Genetic Algorithms for the Tuning of a Fuzzy AQM Controller. ICCSA (1) (2003)
Giuseppe Di Fatta, Frank Hoffmann, Giuseppe Lo Re, Alfonso Urso
A genetic algorithm for the design of a fuzzy controller for active queue management. IEEE Trans. Syst. Man Cybern. Part C 33 (3) (2003)
Giuseppe Di Fatta, Giuseppe Lo Re, Alfonso Urso
A Fuzzy Approach for the Network Congestion Problem. International Conference on Computational Science (1) (2002)